Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC128713.1-201ENST00000471495 306 ntBASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 HSPE1P6-201ENST00000479457 291 ntBASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 AC112673.1-201ENST00000513168 575 ntBASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 RNU6-1282P-201ENST00000516735 96 ntBASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 AC122134.1-202ENST00000569111 1201 ntBASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 AC103810.1-201ENST00000579873 453 ntBASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 MIR5007-201ENST00000583098 95 ntBASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 AC004853.1-201ENST00000604902 698 ntBASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.07□□□□□ -2.08
ZIC4Q8N9L1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 RNU6-270P-201ENST00000364131 105 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 RNU6-76P-201ENST00000384060 104 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 AL591416.1-201ENST00000404015 867 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 LUZP4P1-201ENST00000415420 344 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 AC009414.1-201ENST00000427200 443 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 SEPT7P5-201ENST00000434048 306 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 RPS15AP28-201ENST00000435088 386 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 AC092427.1-201ENST00000439177 601 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 AL714022.1-201ENST00000439897 151 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 AC009296.1-201ENST00000443146 155 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 AC116337.2-201ENST00000477662 156 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 RPL31P41-201ENST00000477967 372 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 RPL23AP70-201ENST00000483361 460 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 AC026414.1-201ENST00000504046 698 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 AC107222.1-201ENST00000510899 637 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 RNA5SP24-201ENST00000516478 95 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 OR4R2P-201ENST00000530815 597 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 AL512310.1-201ENST00000548639 172 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 HSPE1P3-201ENST00000559254 309 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 AC010546.1-201ENST00000569391 485 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 AC138915.2-201ENST00000569776 97 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 MIR4637-201ENST00000582405 84 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 AC090132.2-201ENST00000615881 347 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 AC140725.3-201ENST00000616193 880 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 AC009159.1-201ENST00000618386 642 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 IGHVIII-44-202ENST00000636235 289 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 MKKS-204ENST00000639674 192 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 AC022336.2-201ENST00000568966 2538 ntBASIC2.06□□□□□ -2.08
ZIC4Q8N9L1 AC006020.1-201ENST00000420179 1854 ntBASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 AL049641.1-201ENST00000441055 1948 ntBASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 SNORD114-30-201ENST00000364448 72 ntBASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 RPL7P27-201ENST00000403775 720 ntBASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 Z85995.1-201ENST00000415547 335 ntBASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 LINC00888-204ENST00000487386 421 ntBASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 RPS15AP34-201ENST00000487776 387 ntBASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 AC090453.1-201ENST00000495560 436 ntBASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 RNA5SP82-201ENST00000516707 92 ntBASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 HSPA8P13-201ENST00000523715 472 ntBASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 AC005498.1-201ENST00000592125 465 ntBASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 AC013553.2-201ENST00000604244 589 ntBASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 AL583856.2-201ENST00000606298 543 ntBASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 AL021368.1-201ENST00000607490 540 ntBASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 AL450472.3-201ENST00000615578 367 ntBASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 MIR6130-201ENST00000619419 109 ntBASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
ZIC4Q8N9L1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.04□□□□□ -2.08
ZIC4Q8N9L1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms