Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RNA5SP494-201ENST00000410653 129 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 RPL27AP8-201ENST00000424277 446 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 AC023141.8-201ENST00000442554 208 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 AC079354.2-201ENST00000453523 154 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 RN7SL174P-201ENST00000475578 289 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 SCARNA18.1-201ENST00000516330 83 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 RNU6-612P-201ENST00000516909 102 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 Y_RNA.713-201ENST00000517013 96 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 RNA5SP290-201ENST00000517133 127 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 AC027308.1-201ENST00000517993 110 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 AMZ2P1-203ENST00000565833 850 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 MIR7853-201ENST00000584820 132 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 AC234771.5-201ENST00000600161 514 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 SRGNP1-201ENST00000603392 451 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 AC005046.1-201ENST00000608515 625 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 AL139124.1-201ENST00000609123 421 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 SNORA17.5-201ENST00000630429 132 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 AL360270.2-201ENST00000562952 5985 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 DDX18P3-201ENST00000404856 2007 ntBASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
DEPDC4Q8N2C3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 MIR335-201ENST00000362173 94 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 RNA5SP510-201ENST00000364697 99 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 U3.13-201ENST00000364804 214 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 RNU6-741P-201ENST00000383889 107 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 Y_RNA.785-201ENST00000384290 109 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 MIR10A-201ENST00000385043 110 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 RPS3P2-201ENST00000421346 701 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 AL590135.1-201ENST00000422215 156 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 RPL21P91-201ENST00000429231 479 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 RPS12P17-201ENST00000438591 377 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 AC105399.1-202ENST00000447303 205 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 AC010285.1-201ENST00000470580 392 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 RN7SL177P-201ENST00000476596 299 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 AK3P2-201ENST00000507976 429 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 SNORA31.6-201ENST00000516241 130 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 RNU6-1256P-201ENST00000516539 103 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 RNA5SP271-201ENST00000516700 88 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 RNA5SP230-201ENST00000517039 122 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 RNU6-570P-201ENST00000517051 105 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 RNA5SP291-201ENST00000517222 105 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 IGKV3D-25-201ENST00000519599 235 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 AC025755.1-201ENST00000521306 278 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 AC027369.5-201ENST00000533838 755 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 AC137627.1-201ENST00000545761 289 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 AC004024.1-201ENST00000549244 247 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 AC005476.1-201ENST00000554427 397 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 AC103996.1-201ENST00000555468 102 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 AC104581.2-201ENST00000572227 430 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 AP002826.1-201ENST00000608835 315 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 MIR6768-201ENST00000610734 72 ntBASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
DEPDC4Q8N2C3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 AL022322.2-201ENST00000624072 20397 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 PCAT14-202ENST00000627127 3935 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms