Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LDB1Q86U70 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LDB1Q86U70 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 MIR514A1-201ENST00000385133 98 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 AC110754.1-201ENST00000399740 601 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LDB1Q86U70 RPL21P24-201ENST00000413752 448 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 RPS7P13-201ENST00000413955 498 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.31□□□□□ -1.88
LDB1Q86U70 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.31□□□□□ -1.88
LDB1Q86U70 MTND1P28-201ENST00000435623 950 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 HMGB3P11-201ENST00000440127 604 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LDB1Q86U70 RPL17P49-201ENST00000443728 411 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.31□□□□□ -1.88
LDB1Q86U70 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.31□□□□□ -1.88
LDB1Q86U70 AC008481.1-201ENST00000463278 396 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 AC008155.2-201ENST00000464337 397 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 AC068724.1-201ENST00000487100 792 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 AC093663.1-201ENST00000497190 394 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.31□□□□□ -1.88
LDB1Q86U70 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LDB1Q86U70 AC091965.2-201ENST00000512324 613 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 MTND5P13-201ENST00000513046 1079 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 Y_RNA.695-201ENST00000516715 107 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 AC093331.1-201ENST00000521474 169 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.31□□□□□ -1.88
LDB1Q86U70 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.31□□□□□ -1.88
LDB1Q86U70 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.31□□□□□ -1.88
LDB1Q86U70 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.31□□□□□ -1.88
LDB1Q86U70 AL391813.2-201ENST00000609113 322 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 BX664608.1-201ENST00000610519 487 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.31□□□□□ -1.88
LDB1Q86U70 AL390240.1-201ENST00000612950 384 ntBASIC3.31□□□□□ -1.88
LDB1Q86U70 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LDB1Q86U70 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LDB1Q86U70 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LDB1Q86U70 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LDB1Q86U70 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LDB1Q86U70 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
LDB1Q86U70 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
LDB1Q86U70 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
LDB1Q86U70 AC007496.3-201ENST00000624987 3443 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 AC017071.1-201ENST00000564407 2204 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LDB1Q86U70 RNA5SP50-201ENST00000363731 107 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 RNA5SP171-201ENST00000391071 115 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 RNU2-62P-201ENST00000410868 191 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 RN7SKP142-201ENST00000411236 328 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 RNA5SP107-201ENST00000411358 122 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 SEPT2P1-201ENST00000419651 180 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 NDUFB4P7-201ENST00000423198 363 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.3□□□□□ -1.88
LDB1Q86U70 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.3□□□□□ -1.88
LDB1Q86U70 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.3□□□□□ -1.88
LDB1Q86U70 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.3□□□□□ -1.88
LDB1Q86U70 AC005094.1-201ENST00000440420 368 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 TAF9P1-201ENST00000445421 515 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.3□□□□□ -1.88
LDB1Q86U70 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.3□□□□□ -1.88
LDB1Q86U70 TAF9P2-201ENST00000454958 515 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.3□□□□□ -1.88
LDB1Q86U70 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.3□□□□□ -1.88
LDB1Q86U70 RN7SL293P-201ENST00000481765 281 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 AL049874.1-201ENST00000489560 388 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 SLC25A15P5-201ENST00000508033 253 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 SCARNA15.2-201ENST00000516409 127 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 RNU6-64P-201ENST00000517119 105 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 AP003467.2-201ENST00000520175 319 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 AC100870.1-201ENST00000522035 505 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LDB1Q86U70 AC123904.3-201ENST00000547218 814 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 AL355836.1-201ENST00000555951 870 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.3□□□□□ -1.88
LDB1Q86U70 AC015917.1-201ENST00000579654 510 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 AL606834.2-201ENST00000602954 668 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 AC135507.1-201ENST00000607214 561 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.3□□□□□ -1.88
LDB1Q86U70 AC010133.1-201ENST00000615809 842 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 AL603839.4-201ENST00000624658 1005 ntBASIC3.3□□□□□ -1.88
LDB1Q86U70 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.3□□□□□ -1.88
LDB1Q86U70 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
LDB1Q86U70 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.29□□□□□ -1.88
LDB1Q86U70 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
LDB1Q86U70 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LDB1Q86U70 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LDB1Q86U70 AC092104.1-201ENST00000497346 1441 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.29□□□□□ -1.88
LDB1Q86U70 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.29□□□□□ -1.88
LDB1Q86U70 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LDB1Q86U70 SNORA71.3-201ENST00000362582 128 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 RNA5SP119-201ENST00000362715 117 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LDB1Q86U70 RNU1-39P-201ENST00000383897 165 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 MRPL42P2-201ENST00000403169 426 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 HMGN1P14-201ENST00000412459 517 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 ELOCP17-201ENST00000414751 326 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 AC063979.1-201ENST00000415539 377 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 AC006366.1-201ENST00000422002 759 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 USP12PX-201ENST00000432383 1057 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms