Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 AC012443.1-201ENST00000605605 231 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 AC006023.2-201ENST00000609916 167 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 AL391261.4-201ENST00000616012 481 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 SNHG22-203ENST00000617833 660 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 AC010338.1-201ENST00000621823 717 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 FRG1KP-201ENST00000623592 341 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 U6.98-201ENST00000637157 84 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 MTND5P17-201ENST00000418405 1603 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 RNA5SP322-201ENST00000363617 119 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 SNORD3H-201ENST00000384486 214 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 PTMAP5-201ENST00000393073 333 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 RNA5SP36-201ENST00000410197 133 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 RNU6-373P-201ENST00000411247 98 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 AC007390.1-201ENST00000415722 356 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 AC114491.1-201ENST00000416095 246 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 AC011998.1-201ENST00000433403 117 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 AC090774.1-201ENST00000435925 246 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 GAPDHP27-201ENST00000447427 1020 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 RPS11P1-201ENST00000451072 473 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 RPL21P104-201ENST00000464143 478 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 VN1R17P-201ENST00000472048 1090 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 AC010631.1-201ENST00000474150 156 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 RPS27AP1-201ENST00000475545 471 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 RNU6-1092P-201ENST00000516955 87 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 IGKV2-23-201ENST00000518729 323 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 SUMO2P20-201ENST00000520803 283 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 OR5B10P-201ENST00000532869 642 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 GNRHR2P1-201ENST00000555315 631 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 BNIP3P5-201ENST00000562290 498 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 MIR4775-201ENST00000581168 75 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 AF038458.1-201ENST00000588406 262 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 MIR486-1-201ENST00000612171 68 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 AC004696.1-201ENST00000614345 607 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 AL353748.2-201ENST00000622148 471 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 AC100810.6-201ENST00000638068 285 ntBASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
PTCHD4Q6ZW05 ASNSP3-201ENST00000451989 1306 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 RNU6-179P-201ENST00000363350 107 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 Y_RNA.157-201ENST00000363638 102 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 SNORA23-201ENST00000365128 182 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 RNU6-398P-201ENST00000384143 109 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 SNORD37.1-201ENST00000390968 65 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 RNU6-882P-201ENST00000391025 103 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 AL359634.1-202ENST00000404721 284 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 ATP5HP2-201ENST00000433885 485 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 VDAC1P3-201ENST00000434069 851 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 AL121871.1-201ENST00000443413 436 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 RPL7L1P8-201ENST00000469911 741 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 RN7SL691P-201ENST00000494487 301 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 HMGB3P15-201ENST00000507326 574 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 AC004062.1-201ENST00000509926 645 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 RNA5SP519-201ENST00000516480 119 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 RN7SKP219-201ENST00000516825 296 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 RNA5SP143-201ENST00000516936 115 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 NARSP2-201ENST00000518524 679 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 RAB11AP2-201ENST00000545905 639 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 NCAPGP2-201ENST00000557911 754 ntBASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.76□□□□□ -1.81
PTCHD4Q6ZW05 AC018638.8-201ENST00000588755 281 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms