Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AC027287.1-201ENST00000553115 1453 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 NACAP2-201ENST00000318548 624 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AC126755.2-208ENST00000327792 462 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AC138969.1-213ENST00000331436 462 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 SNORA51.2-201ENST00000364595 132 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 RNU4-48P-201ENST00000365559 182 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 MIR558-201ENST00000384920 94 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 CHIAP3-201ENST00000423668 1133 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AC137499.1-201ENST00000427602 88 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AL358472.1-201ENST00000431295 329 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 MTATP6P16-201ENST00000434543 526 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 DDX3P2-201ENST00000446138 111 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AC140076.1-201ENST00000449897 361 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 BX276092.4-201ENST00000452056 248 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AC233279.1-201ENST00000455300 423 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AC006512.1-201ENST00000468816 291 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 RN7SL385P-201ENST00000468873 276 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 RN7SL860P-201ENST00000473738 223 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AC105137.1-201ENST00000484355 562 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AC103851.1-201ENST00000506833 274 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 IGKV2-38-201ENST00000517443 247 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 NARSP2-201ENST00000518524 679 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AC037471.2-201ENST00000564941 598 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AC022432.1-201ENST00000595739 310 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AC104662.1-201ENST00000604448 511 ntBASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.55□□□□□ -1.84
COLCA1Q6ZS62 FAM91A3P-201ENST00000456826 2544 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 MTND4P35-201ENST00000604257 1375 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 AC004972.1-201ENST00000623934 2209 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 ASNSP3-201ENST00000451989 1306 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 SNORA60-201ENST00000362396 134 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 Y_RNA.184-201ENST00000363884 108 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 Y_RNA.419-201ENST00000384041 102 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 RNU6-339P-201ENST00000384310 107 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 MIR514A2-201ENST00000385131 88 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 MIR514A3-201ENST00000385132 88 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 Y_RNA.615-201ENST00000410769 117 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 AL645937.1-202ENST00000421799 937 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 RPL35AP12-201ENST00000425362 338 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 RPL21P112-201ENST00000434403 463 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 RPL7P12-201ENST00000446719 750 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 AC006480.1-201ENST00000449887 378 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 AL049714.1-201ENST00000466686 347 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 RN7SL604P-201ENST00000492589 296 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 HMGN1P13-201ENST00000505795 138 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 TMEM248P1-201ENST00000510579 951 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 AC005798.1-201ENST00000513715 387 ntBASIC3.54□□□□□ -1.84
COLCA1Q6ZS62 RN7SKP219-201ENST00000516825 296 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms