Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC002075.2-201ENST00000425207 252 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 RPL36AP53-201ENST00000432891 316 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AP1S2P1-201ENST00000457344 379 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 RPS3AP50-201ENST00000487064 803 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 NPM1P41-201ENST00000512920 831 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AC104057.1-201ENST00000515547 497 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 HPRT1P3-201ENST00000539521 576 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AC015917.1-201ENST00000579654 510 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 RPL23AP92-201ENST00000603609 255 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AC064836.2-201ENST00000609491 462 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AL132765.2-201ENST00000610812 351 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AL732372.2-225ENST00000642124 456 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 AC097714.1-201ENST00000511272 1647 ntBASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
ZNF549Q6P9A3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 AL139811.1-201ENST00000424779 2299 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 MTND5P28-201ENST00000438005 1594 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 RPL7P26-201ENST00000333817 754 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 RNU4-79P-201ENST00000362764 141 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 Y_RNA.166-201ENST00000363730 102 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 RNY4P16-201ENST00000364768 94 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 RNU6-767P-201ENST00000384132 107 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 RNU6-332P-201ENST00000391193 108 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 AL356421.1-201ENST00000403255 413 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 AL356432.1-201ENST00000405809 419 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 AL354719.1-201ENST00000406535 843 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 RPL31P45-201ENST00000419532 356 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 RPL23AP30-201ENST00000432419 501 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 RPS29P31-201ENST00000446147 164 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 CACYBPP2-201ENST00000453625 678 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 RNU6-261P-201ENST00000459506 102 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 AC084357.1-201ENST00000473404 255 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 AC055855.1-201ENST00000489563 579 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 AC093278.1-201ENST00000494700 600 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 PCBP2P3-201ENST00000509726 843 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 MIR4504-201ENST00000577413 92 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 MIR4738-201ENST00000579134 87 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 AC005498.1-201ENST00000592125 465 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 AC121334.2-201ENST00000605387 271 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 AC099669.2-201ENST00000616549 437 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 AC126177.8-201ENST00000618339 1015 ntBASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
ZNF549Q6P9A3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 RNU6-28P-201ENST00000362378 107 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 RNU6-1243P-201ENST00000364028 107 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 SNORD3H-201ENST00000384486 214 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AL356057.2-201ENST00000403318 432 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 RNU6-1148P-201ENST00000410992 104 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AC006548.1-201ENST00000427470 102 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 snoU13.7-201ENST00000459220 104 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AP001992.1-205ENST00000462248 379 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 HMGN1P10-201ENST00000474557 553 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms