Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AC108078.2-201ENST00000510750 236 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 RNU6-256P-201ENST00000516747 97 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 RN7SKP277-201ENST00000516895 283 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 DNAJC8P1-201ENST00000554535 372 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 MIR5690-201ENST00000583739 73 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 AC091178.1-203ENST00000584586 279 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 AL355812.1-201ENST00000603215 216 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 7SK.10-201ENST00000621414 298 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 TPTE2P4-201ENST00000258589 1605 ntBASIC5.45□□□□□ -1.54
PRPF40BQ6NWY9 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 MTND5P10-201ENST00000603719 1809 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 SNORA71.3-201ENST00000362582 128 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 RNU6-637P-201ENST00000384050 107 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 RNU6-463P-201ENST00000384340 107 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 EIF4E2P1-201ENST00000393781 255 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 AL109755.1-201ENST00000401791 649 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 AC020550.1-201ENST00000447385 163 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 PPIAP3-201ENST00000450588 505 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 MTND5P22-201ENST00000458380 195 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 RPL21P8-201ENST00000465083 535 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 AC087385.1-201ENST00000475062 312 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 VN1R105P-201ENST00000486595 910 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 RPS27P27-201ENST00000498779 255 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 AC021146.2-201ENST00000504736 556 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 RNA5SP454-201ENST00000517231 127 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 AC090136.1-201ENST00000520009 240 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 RANP3-201ENST00000530970 276 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 SETP7-201ENST00000552169 453 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 AC106782.4-201ENST00000568264 210 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 AC024619.4-201ENST00000580924 316 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 AC104662.1-201ENST00000604448 511 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 AC140113.4-201ENST00000622087 222 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 AC091925.1-201ENST00000623204 462 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 AC139713.2-215ENST00000641428 5037 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 EXOC5P1-201ENST00000510543 1969 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PRPF40BQ6NWY9 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 ZNF33CP-201ENST00000432492 2030 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 Y_RNA.31-201ENST00000362574 102 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 RNA5SP130-201ENST00000364431 114 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 RNU6-339P-201ENST00000384310 107 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 PTMAP2-201ENST00000397627 327 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AL356057.3-201ENST00000402607 340 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 RNU2-47P-201ENST00000410649 186 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 RN7SKP167-201ENST00000411047 285 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AC093106.2-201ENST00000428212 385 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 RPS29P7-201ENST00000439662 171 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 MRPS31P2-201ENST00000451581 518 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 RPS27AP1-201ENST00000475545 471 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AC146944.2-203ENST00000502493 354 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AC139495.1-202ENST00000513164 354 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 SMURF2P1-201ENST00000514992 481 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 RNU6-189P-201ENST00000516120 101 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AC022634.1-201ENST00000520765 532 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 COPS8P3-201ENST00000526024 482 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 DEFB108D-201ENST00000527787 222 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AC018630.1-201ENST00000541376 925 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 IMMP1LP2-201ENST00000552954 492 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AC053481.4-201ENST00000583164 216 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 MIR4293-201ENST00000584305 78 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms