Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRT40Q6A162 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRT40Q6A162 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRT40Q6A162 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRT40Q6A162 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
KRT40Q6A162 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRT40Q6A162 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRT40Q6A162 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRT40Q6A162 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
KRT40Q6A162 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.5□□□□□ -1.69
KRT40Q6A162 AL445437.1-201ENST00000623157 3087 ntBASIC4.5□□□□□ -1.69
KRT40Q6A162 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
KRT40Q6A162 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
KRT40Q6A162 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRT40Q6A162 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
KRT40Q6A162 Y_RNA.22-201ENST00000362492 102 ntBASIC4.5□□□□□ -1.69
KRT40Q6A162 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRT40Q6A162 MIR19A-201ENST00000384878 82 ntBASIC4.5□□□□□ -1.69
KRT40Q6A162 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
KRT40Q6A162 MIR708-201ENST00000390708 88 ntBASIC4.5□□□□□ -1.69
KRT40Q6A162 RNU6-332P-201ENST00000391193 108 ntBASIC4.5□□□□□ -1.69
KRT40Q6A162 U3.29-201ENST00000391296 212 ntBASIC4.5□□□□□ -1.69
KRT40Q6A162 AL356057.2-201ENST00000403318 432 ntBASIC4.5□□□□□ -1.69
KRT40Q6A162 AL136116.1-201ENST00000403591 381 ntBASIC4.5□□□□□ -1.69
KRT40Q6A162 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.5□□□□□ -1.69
KRT40Q6A162 ATP5HP2-201ENST00000433885 485 ntBASIC4.5□□□□□ -1.69
KRT40Q6A162 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.5□□□□□ -1.69
KRT40Q6A162 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRT40Q6A162 CBWD4P-201ENST00000445695 655 ntBASIC4.5□□□□□ -1.69
KRT40Q6A162 AC026427.2-201ENST00000506228 536 ntBASIC4.5□□□□□ -1.69
KRT40Q6A162 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.5□□□□□ -1.69
KRT40Q6A162 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.5□□□□□ -1.69
KRT40Q6A162 AC078814.3-201ENST00000553036 491 ntBASIC4.5□□□□□ -1.69
KRT40Q6A162 GLUD1P4-201ENST00000590914 418 ntBASIC4.5□□□□□ -1.69
KRT40Q6A162 AC103710.2-201ENST00000609912 942 ntBASIC4.5□□□□□ -1.69
KRT40Q6A162 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.5□□□□□ -1.69
KRT40Q6A162 AL391261.4-201ENST00000616012 481 ntBASIC4.5□□□□□ -1.69
KRT40Q6A162 AL158196.1-201ENST00000616786 434 ntBASIC4.5□□□□□ -1.69
KRT40Q6A162 AL354950.2-201ENST00000617939 290 ntBASIC4.5□□□□□ -1.69
KRT40Q6A162 AC090617.10-201ENST00000624308 134 ntBASIC4.5□□□□□ -1.69
KRT40Q6A162 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.5□□□□□ -1.69
KRT40Q6A162 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRT40Q6A162 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KRT40Q6A162 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
KRT40Q6A162 RNY1P12-201ENST00000364251 105 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 Y_RNA.367-201ENST00000365544 101 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.49□□□□□ -1.69
KRT40Q6A162 MIR218-2-201ENST00000385006 110 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
KRT40Q6A162 AL162578.1-201ENST00000406202 378 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.49□□□□□ -1.69
KRT40Q6A162 AL353678.1-201ENST00000422735 741 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 SRIP2-201ENST00000428470 166 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.49□□□□□ -1.69
KRT40Q6A162 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.49□□□□□ -1.69
KRT40Q6A162 AL356010.1-201ENST00000456364 102 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 RNU7-63P-201ENST00000459054 62 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 AC087385.1-201ENST00000475062 312 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 PPIAP15-201ENST00000479662 484 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 AC110792.1-201ENST00000491826 472 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 EIF4EP3-201ENST00000498782 656 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.49□□□□□ -1.69
KRT40Q6A162 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.49□□□□□ -1.69
KRT40Q6A162 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.49□□□□□ -1.69
KRT40Q6A162 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.49□□□□□ -1.69
KRT40Q6A162 SNORD27.1-201ENST00000516319 72 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 RNU6-410P-201ENST00000517006 107 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 AC105029.1-201ENST00000520250 669 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 OR4R1P-201ENST00000529879 463 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 AC243972.3-201ENST00000539655 198 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 AC090877.1-201ENST00000561418 344 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 AC037471.2-201ENST00000564941 598 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 AC105224.1-201ENST00000587055 421 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 VN1R80P-201ENST00000597126 338 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.49□□□□□ -1.69
KRT40Q6A162 KC877982.1-201ENST00000602313 470 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 AC013553.2-201ENST00000604244 589 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 AC021646.1-201ENST00000605469 484 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 AC064836.2-201ENST00000609491 462 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 FRG1KP-201ENST00000623592 341 ntBASIC4.49□□□□□ -1.69
KRT40Q6A162 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.49□□□□□ -1.69
KRT40Q6A162 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.49□□□□□ -1.69
KRT40Q6A162 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRT40Q6A162 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRT40Q6A162 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
KRT40Q6A162 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.48□□□□□ -1.69
KRT40Q6A162 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRT40Q6A162 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KRT40Q6A162 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KRT40Q6A162 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.48□□□□□ -1.69
KRT40Q6A162 OR1S2-201ENST00000302592 978 ntBASIC4.48□□□□□ -1.69
KRT40Q6A162 RNY3P13-201ENST00000365542 102 ntBASIC4.48□□□□□ -1.69
KRT40Q6A162 FAT1P1-201ENST00000406588 507 ntBASIC4.48□□□□□ -1.69
KRT40Q6A162 RNU6-373P-201ENST00000411247 98 ntBASIC4.48□□□□□ -1.69
KRT40Q6A162 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.48□□□□□ -1.69
KRT40Q6A162 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.48□□□□□ -1.69
KRT40Q6A162 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.48□□□□□ -1.69
KRT40Q6A162 MTCO3P46-201ENST00000425787 232 ntBASIC4.48□□□□□ -1.69
KRT40Q6A162 CYCSP43-201ENST00000438233 310 ntBASIC4.48□□□□□ -1.69
KRT40Q6A162 AC079781.2-201ENST00000446424 169 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms