Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 AC005019.1-201ENST00000436455 431 ntBASIC4.67□□□□□ -1.66
E4F1Q66K89 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.67□□□□□ -1.66
E4F1Q66K89 AC107399.1-201ENST00000451226 265 ntBASIC4.67□□□□□ -1.66
E4F1Q66K89 RPL35AP28-201ENST00000459730 331 ntBASIC4.67□□□□□ -1.66
E4F1Q66K89 VN1R105P-201ENST00000486595 910 ntBASIC4.67□□□□□ -1.66
E4F1Q66K89 RPL7P23-201ENST00000493874 747 ntBASIC4.67□□□□□ -1.66
E4F1Q66K89 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.67□□□□□ -1.66
E4F1Q66K89 RNU6-1088P-201ENST00000516850 104 ntBASIC4.67□□□□□ -1.66
E4F1Q66K89 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
E4F1Q66K89 AP000827.1-201ENST00000527814 258 ntBASIC4.67□□□□□ -1.66
E4F1Q66K89 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.67□□□□□ -1.66
E4F1Q66K89 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.67□□□□□ -1.66
E4F1Q66K89 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.67□□□□□ -1.66
E4F1Q66K89 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.67□□□□□ -1.66
E4F1Q66K89 AC079587.1-201ENST00000603846 277 ntBASIC4.67□□□□□ -1.66
E4F1Q66K89 AL670379.4-201ENST00000605279 254 ntBASIC4.67□□□□□ -1.66
E4F1Q66K89 AL158032.1-201ENST00000605401 106 ntBASIC4.67□□□□□ -1.66
E4F1Q66K89 HMGB1P50-201ENST00000605814 607 ntBASIC4.67□□□□□ -1.66
E4F1Q66K89 AL627309.6-201ENST00000606857 840 ntBASIC4.67□□□□□ -1.66
E4F1Q66K89 Z82243.1-201ENST00000609432 473 ntBASIC4.67□□□□□ -1.66
E4F1Q66K89 DUSP12P1-201ENST00000612874 516 ntBASIC4.67□□□□□ -1.66
E4F1Q66K89 AC243312.2-201ENST00000623340 601 ntBASIC4.67□□□□□ -1.66
E4F1Q66K89 AC134503.1-201ENST00000633048 54 ntBASIC4.67□□□□□ -1.66
E4F1Q66K89 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
E4F1Q66K89 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
E4F1Q66K89 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
E4F1Q66K89 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.67□□□□□ -1.66
E4F1Q66K89 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
E4F1Q66K89 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
E4F1Q66K89 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
E4F1Q66K89 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
E4F1Q66K89 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
E4F1Q66K89 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
E4F1Q66K89 SNORD113-7-201ENST00000363762 77 ntBASIC4.66□□□□□ -1.66
E4F1Q66K89 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
E4F1Q66K89 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
E4F1Q66K89 MIR298-201ENST00000401212 88 ntBASIC4.66□□□□□ -1.66
E4F1Q66K89 RNU4-14P-201ENST00000410858 122 ntBASIC4.66□□□□□ -1.66
E4F1Q66K89 RNU6-387P-201ENST00000411331 105 ntBASIC4.66□□□□□ -1.66
E4F1Q66K89 POLHP1-201ENST00000411806 470 ntBASIC4.66□□□□□ -1.66
E4F1Q66K89 TMSB10P2-201ENST00000416049 131 ntBASIC4.66□□□□□ -1.66
E4F1Q66K89 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.66□□□□□ -1.66
E4F1Q66K89 RPL21P126-201ENST00000470049 478 ntBASIC4.66□□□□□ -1.66
E4F1Q66K89 AC027575.1-201ENST00000481064 460 ntBASIC4.66□□□□□ -1.66
E4F1Q66K89 AC068587.1-201ENST00000483613 781 ntBASIC4.66□□□□□ -1.66
E4F1Q66K89 KLHL2P1-201ENST00000508691 521 ntBASIC4.66□□□□□ -1.66
E4F1Q66K89 IGKV1-32-201ENST00000519290 311 ntBASIC4.66□□□□□ -1.66
E4F1Q66K89 AP000889.2-201ENST00000532684 490 ntBASIC4.66□□□□□ -1.66
E4F1Q66K89 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.66□□□□□ -1.66
E4F1Q66K89 AC107016.1-201ENST00000550463 337 ntBASIC4.66□□□□□ -1.66
E4F1Q66K89 AC126177.3-201ENST00000551839 688 ntBASIC4.66□□□□□ -1.66
E4F1Q66K89 AC106782.4-201ENST00000568264 210 ntBASIC4.66□□□□□ -1.66
E4F1Q66K89 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.66□□□□□ -1.66
E4F1Q66K89 MIR4458-201ENST00000578872 75 ntBASIC4.66□□□□□ -1.66
E4F1Q66K89 MIR3171-201ENST00000584270 74 ntBASIC4.66□□□□□ -1.66
E4F1Q66K89 RAD17P1-201ENST00000418130 2042 ntBASIC4.66□□□□□ -1.66
E4F1Q66K89 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
E4F1Q66K89 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
E4F1Q66K89 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.66□□□□□ -1.66
E4F1Q66K89 MTCO1P24-201ENST00000515438 1558 ntBASIC4.65□□□□□ -1.66
E4F1Q66K89 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
E4F1Q66K89 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
E4F1Q66K89 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
E4F1Q66K89 FAM35DP-201ENST00000323387 2712 ntBASIC4.65□□□□□ -1.66
E4F1Q66K89 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.65□□□□□ -1.66
E4F1Q66K89 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
E4F1Q66K89 Y_RNA.167-201ENST00000363735 109 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 RNVU1-6-201ENST00000364688 164 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 MIR3065-201ENST00000390137 79 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 SNORA3C-201ENST00000408792 125 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 SSXP9-201ENST00000417503 292 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.65□□□□□ -1.67
E4F1Q66K89 AC011742.1-201ENST00000431448 434 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.65□□□□□ -1.67
E4F1Q66K89 CYCSP43-201ENST00000438233 310 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 GTF2IP13-201ENST00000438487 386 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 GAPDHP27-201ENST00000447427 1020 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 RPL29P29-201ENST00000448725 423 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 SCARNA18-201ENST00000459004 134 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 AC116533.1-201ENST00000459748 321 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 AC012181.1-201ENST00000479895 423 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.65□□□□□ -1.67
E4F1Q66K89 TRBVA-201ENST00000498804 316 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.65□□□□□ -1.67
E4F1Q66K89 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.65□□□□□ -1.67
E4F1Q66K89 RPL39P5-202ENST00000512505 151 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 RNU6-123P-201ENST00000516163 102 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 RNU6-1045P-201ENST00000516321 107 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 Y_RNA.718-201ENST00000517110 102 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.65□□□□□ -1.67
E4F1Q66K89 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.65□□□□□ -1.67
E4F1Q66K89 AC084783.1-201ENST00000565846 910 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 MIR4790-201ENST00000577799 79 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 IGHV3-29-201ENST00000604817 344 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 AC080078.3-201ENST00000605407 463 ntBASIC4.65□□□□□ -1.67
E4F1Q66K89 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.65□□□□□ -1.67
E4F1Q66K89 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.65□□□□□ -1.67
E4F1Q66K89 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.65□□□□□ -1.67
E4F1Q66K89 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.65□□□□□ -1.67
E4F1Q66K89 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms