Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC110754.1-201ENST00000399740 601 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 SNORA57.3-201ENST00000411095 141 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.34□□□□□ -1.87
EFNB3Q15768 AL159169.1-201ENST00000421119 127 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 MTATP6P4-201ENST00000427725 675 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 MED13P1-201ENST00000428342 171 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 USP12PX-201ENST00000432383 1057 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.34□□□□□ -1.87
EFNB3Q15768 AC024082.2-201ENST00000434771 238 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.34□□□□□ -1.87
EFNB3Q15768 HMGB1P37-201ENST00000439613 609 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
EFNB3Q15768 AL121769.1-201ENST00000469473 401 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.34□□□□□ -1.87
EFNB3Q15768 AP002812.1-201ENST00000495378 474 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 RPL7P47-201ENST00000497299 556 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 UBE2CP3-201ENST00000502715 450 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 AC105914.1-201ENST00000511798 226 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 RNA5SP164-201ENST00000516533 110 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 RNU1-45P-201ENST00000517191 141 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 AC023632.4-201ENST00000517783 191 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.34□□□□□ -1.87
EFNB3Q15768 ERHP1-201ENST00000523006 310 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 OR5AQ1P-201ENST00000527596 927 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.34□□□□□ -1.87
EFNB3Q15768 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.34□□□□□ -1.87
EFNB3Q15768 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.34□□□□□ -1.87
EFNB3Q15768 AL157687.1-201ENST00000554853 619 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.34□□□□□ -1.87
EFNB3Q15768 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.34□□□□□ -1.87
EFNB3Q15768 SNORA59B-202ENST00000578183 701 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 AF038458.1-201ENST00000588406 262 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.34□□□□□ -1.87
EFNB3Q15768 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.34□□□□□ -1.87
EFNB3Q15768 AC244505.7-201ENST00000599675 272 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 AP002360.4-201ENST00000606980 481 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 AP001330.5-201ENST00000607176 411 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 FP236240.3-201ENST00000623061 327 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 AC112200.1-201ENST00000625015 234 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 AL773545.4-201ENST00000637262 310 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 AL513478.4-201ENST00000641636 310 ntBASIC3.34□□□□□ -1.87
EFNB3Q15768 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.34□□□□□ -1.87
EFNB3Q15768 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.34□□□□□ -1.87
EFNB3Q15768 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
EFNB3Q15768 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
EFNB3Q15768 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
EFNB3Q15768 AC116096.1-201ENST00000566804 2314 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
EFNB3Q15768 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
EFNB3Q15768 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.33□□□□□ -1.88
EFNB3Q15768 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.33□□□□□ -1.88
EFNB3Q15768 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
EFNB3Q15768 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
EFNB3Q15768 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
EFNB3Q15768 Y_RNA.248-201ENST00000364501 109 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 SNORA62.3-201ENST00000365110 153 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 Y_RNA.402-201ENST00000383972 102 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 U1.1-201ENST00000384101 164 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 RNU6-39P-201ENST00000384344 107 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 MIR199A2-201ENST00000385289 110 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 RPS4XP8-201ENST00000402039 771 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 AL359634.1-202ENST00000404721 284 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 TXNP7-201ENST00000406296 293 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 RN7SKP156-201ENST00000410308 342 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.33□□□□□ -1.88
EFNB3Q15768 OR2AS1P-201ENST00000427827 319 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 AC079780.1-201ENST00000428259 207 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 AC000111.3-201ENST00000433478 193 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.33□□□□□ -1.88
EFNB3Q15768 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.33□□□□□ -1.88
EFNB3Q15768 SNRPGP6-201ENST00000451124 220 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.33□□□□□ -1.88
EFNB3Q15768 SNORA84-201ENST00000459229 133 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.33□□□□□ -1.88
EFNB3Q15768 ARL2BPP6-201ENST00000512757 439 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.33□□□□□ -1.88
EFNB3Q15768 Y_RNA.693-201ENST00000516641 110 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.33□□□□□ -1.88
EFNB3Q15768 OR4R1P-201ENST00000529879 463 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.33□□□□□ -1.88
EFNB3Q15768 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.33□□□□□ -1.88
EFNB3Q15768 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.33□□□□□ -1.88
EFNB3Q15768 ARL2BPP2-201ENST00000550907 489 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 AL512360.1-201ENST00000555346 234 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 HMGB1P6-201ENST00000569046 646 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.33□□□□□ -1.88
EFNB3Q15768 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.33□□□□□ -1.88
EFNB3Q15768 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
EFNB3Q15768 U6.98-201ENST00000637157 84 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.33□□□□□ -1.88
EFNB3Q15768 AP004289.2-201ENST00000444413 1457 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
EFNB3Q15768 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
EFNB3Q15768 AC092326.2-201ENST00000624772 1561 ntBASIC3.33□□□□□ -1.88
EFNB3Q15768 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
EFNB3Q15768 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
EFNB3Q15768 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
EFNB3Q15768 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
EFNB3Q15768 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
EFNB3Q15768 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms