Protein–RNA interactions for Protein: Q02880

TOP2B, DNA topoisomerase 2-beta, humanhuman

Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2BQ02880 AP000560.1-201ENST00000624150 1937 ntBASIC2.22□□□□□ -2.05
TOP2BQ02880 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.22□□□□□ -2.05
TOP2BQ02880 RNA5SP189-201ENST00000364920 115 ntBASIC2.21□□□□□ -2.06
TOP2BQ02880 RNY1P4-201ENST00000384595 115 ntBASIC2.21□□□□□ -2.06
TOP2BQ02880 AC093084.1-201ENST00000424233 687 ntBASIC2.21□□□□□ -2.06
TOP2BQ02880 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.21□□□□□ -2.06
TOP2BQ02880 UBE2V1P13-201ENST00000436983 439 ntBASIC2.21□□□□□ -2.06
TOP2BQ02880 HMGN2P21-201ENST00000447764 270 ntBASIC2.21□□□□□ -2.06
TOP2BQ02880 AC006499.2-201ENST00000513470 337 ntBASIC2.21□□□□□ -2.06
TOP2BQ02880 AP003033.1-201ENST00000527244 415 ntBASIC2.21□□□□□ -2.06
TOP2BQ02880 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.21□□□□□ -2.06
TOP2BQ02880 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.21□□□□□ -2.06
TOP2BQ02880 RNU1-139P-201ENST00000391307 165 ntBASIC2.2□□□□□ -2.06
TOP2BQ02880 AC109780.2-201ENST00000413467 845 ntBASIC2.2□□□□□ -2.06
TOP2BQ02880 AC234781.2-201ENST00000426370 994 ntBASIC2.2□□□□□ -2.06
TOP2BQ02880 SNRPGP13-201ENST00000442212 177 ntBASIC2.2□□□□□ -2.06
TOP2BQ02880 HMGN2P18-201ENST00000450680 270 ntBASIC2.2□□□□□ -2.06
TOP2BQ02880 snoU13.3-201ENST00000459441 104 ntBASIC2.2□□□□□ -2.06
TOP2BQ02880 MKKS-204ENST00000639674 192 ntBASIC2.2□□□□□ -2.06
TOP2BQ02880 Z82195.2-201ENST00000612348 18351 ntBASIC2.2□□□□□ -2.06
TOP2BQ02880 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.2□□□□□ -2.06
TOP2BQ02880 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TOP2BQ02880 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TOP2BQ02880 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TOP2BQ02880 ANAPC10P1-201ENST00000395991 556 ntBASIC2.2□□□□□ -2.06
TOP2BQ02880 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.2□□□□□ -2.06
TOP2BQ02880 SNRPFP3-201ENST00000457792 225 ntBASIC2.2□□□□□ -2.06
TOP2BQ02880 RPL21P103-201ENST00000479921 488 ntBASIC2.2□□□□□ -2.06
TOP2BQ02880 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.2□□□□□ -2.06
TOP2BQ02880 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.2□□□□□ -2.06
TOP2BQ02880 ANP32BP3-201ENST00000559213 706 ntBASIC2.2□□□□□ -2.06
TOP2BQ02880 MIR5694-201ENST00000581190 76 ntBASIC2.2□□□□□ -2.06
TOP2BQ02880 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.2□□□□□ -2.06
TOP2BQ02880 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.19□□□□□ -2.06
TOP2BQ02880 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TOP2BQ02880 RNA5SP38-201ENST00000410750 119 ntBASIC2.19□□□□□ -2.06
TOP2BQ02880 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.19□□□□□ -2.06
TOP2BQ02880 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.19□□□□□ -2.06
TOP2BQ02880 FABP5P3-201ENST00000437960 408 ntBASIC2.19□□□□□ -2.06
TOP2BQ02880 AL078601.1-201ENST00000444542 271 ntBASIC2.19□□□□□ -2.06
TOP2BQ02880 AC019176.1-201ENST00000518519 225 ntBASIC2.19□□□□□ -2.06
TOP2BQ02880 AC087854.1-201ENST00000519706 414 ntBASIC2.19□□□□□ -2.06
TOP2BQ02880 RNA5SP108-201ENST00000605921 117 ntBASIC2.19□□□□□ -2.06
TOP2BQ02880 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.19□□□□□ -2.06
TOP2BQ02880 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.19□□□□□ -2.06
TOP2BQ02880 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TOP2BQ02880 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
TOP2BQ02880 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TOP2BQ02880 RPL31P52-201ENST00000407532 367 ntBASIC2.18□□□□□ -2.06
TOP2BQ02880 MTND4LP21-201ENST00000415303 295 ntBASIC2.18□□□□□ -2.06
TOP2BQ02880 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.18□□□□□ -2.06
TOP2BQ02880 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.18□□□□□ -2.06
TOP2BQ02880 FAM106CP-201ENST00000582212 507 ntBASIC2.18□□□□□ -2.06
TOP2BQ02880 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TOP2BQ02880 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.18□□□□□ -2.06
TOP2BQ02880 AL356118.1-201ENST00000635272 1078 ntBASIC2.18□□□□□ -2.06
TOP2BQ02880 PABPC1P9-201ENST00000426076 1612 ntBASIC2.18□□□□□ -2.06
TOP2BQ02880 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TOP2BQ02880 RNU6-1105P-201ENST00000384774 107 ntBASIC2.17□□□□□ -2.06
TOP2BQ02880 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.17□□□□□ -2.06
TOP2BQ02880 AL030996.1-201ENST00000411430 235 ntBASIC2.17□□□□□ -2.06
TOP2BQ02880 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.17□□□□□ -2.06
TOP2BQ02880 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
TOP2BQ02880 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.17□□□□□ -2.06
TOP2BQ02880 AC239860.2-201ENST00000525886 270 ntBASIC2.17□□□□□ -2.06
TOP2BQ02880 CBX3P2-202ENST00000583365 535 ntBASIC2.17□□□□□ -2.06
TOP2BQ02880 AC121761.2-201ENST00000617300 689 ntBASIC2.17□□□□□ -2.06
TOP2BQ02880 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.17□□□□□ -2.06
TOP2BQ02880 AC135776.4-201ENST00000624300 1904 ntBASIC2.17□□□□□ -2.06
TOP2BQ02880 CUL4AP1-201ENST00000514750 1863 ntBASIC2.17□□□□□ -2.06
TOP2BQ02880 RNA5SP457-201ENST00000363657 124 ntBASIC2.17□□□□□ -2.06
TOP2BQ02880 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC2.17□□□□□ -2.06
TOP2BQ02880 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.17□□□□□ -2.06
TOP2BQ02880 MTCO1P48-201ENST00000448024 1096 ntBASIC2.17□□□□□ -2.06
TOP2BQ02880 AC010627.1-201ENST00000503819 1294 ntBASIC2.17□□□□□ -2.06
TOP2BQ02880 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.17□□□□□ -2.06
TOP2BQ02880 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.17□□□□□ -2.06
TOP2BQ02880 AC245036.5-201ENST00000596330 847 ntBASIC2.17□□□□□ -2.06
TOP2BQ02880 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TOP2BQ02880 AP000648.3-201ENST00000623539 4507 ntBASIC2.16□□□□□ -2.06
TOP2BQ02880 SNORD114-27-201ENST00000363766 70 ntBASIC2.16□□□□□ -2.06
TOP2BQ02880 Y_RNA.433-201ENST00000384089 102 ntBASIC2.16□□□□□ -2.06
TOP2BQ02880 RNU2-25P-201ENST00000411041 191 ntBASIC2.16□□□□□ -2.06
TOP2BQ02880 RNU6-516P-201ENST00000411381 104 ntBASIC2.16□□□□□ -2.06
TOP2BQ02880 TRGV6-201ENST00000417928 299 ntBASIC2.16□□□□□ -2.06
TOP2BQ02880 RPL23AP41-201ENST00000484754 458 ntBASIC2.16□□□□□ -2.06
TOP2BQ02880 Y_RNA.681-201ENST00000516445 113 ntBASIC2.16□□□□□ -2.06
TOP2BQ02880 RNU4-60P-201ENST00000517239 135 ntBASIC2.16□□□□□ -2.06
TOP2BQ02880 DUXAP5-201ENST00000529668 529 ntBASIC2.16□□□□□ -2.06
TOP2BQ02880 NOP56P3-201ENST00000549457 385 ntBASIC2.16□□□□□ -2.06
TOP2BQ02880 AC096772.1-201ENST00000609146 564 ntBASIC2.16□□□□□ -2.06
TOP2BQ02880 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
TOP2BQ02880 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
TOP2BQ02880 MIR222-201ENST00000384992 110 ntBASIC2.15□□□□□ -2.07
TOP2BQ02880 AP000567.1-201ENST00000406413 156 ntBASIC2.15□□□□□ -2.07
TOP2BQ02880 AP001180.3-201ENST00000582221 145 ntBASIC2.15□□□□□ -2.07
TOP2BQ02880 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.15□□□□□ -2.07
TOP2BQ02880 AC013553.2-201ENST00000604244 589 ntBASIC2.15□□□□□ -2.07
TOP2BQ02880 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.15□□□□□ -2.07
TOP2BQ02880 MTND4P34-201ENST00000572715 1371 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 158.8 ms