Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.54□□□□□ -2.16
HIST1H1AQ02539 DEFB108D-201ENST00000527787 222 ntBASIC1.54□□□□□ -2.16
HIST1H1AQ02539 OR8K4P-201ENST00000534608 872 ntBASIC1.54□□□□□ -2.16
HIST1H1AQ02539 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.54□□□□□ -2.16
HIST1H1AQ02539 AC026464.5-201ENST00000562497 722 ntBASIC1.54□□□□□ -2.16
HIST1H1AQ02539 MTCO3P22-201ENST00000603219 784 ntBASIC1.54□□□□□ -2.16
HIST1H1AQ02539 AC093838.1-201ENST00000613014 469 ntBASIC1.54□□□□□ -2.16
HIST1H1AQ02539 AC109809.1-201ENST00000619665 545 ntBASIC1.54□□□□□ -2.16
HIST1H1AQ02539 AP003400.5-201ENST00000624827 617 ntBASIC1.54□□□□□ -2.16
HIST1H1AQ02539 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.54□□□□□ -2.16
HIST1H1AQ02539 AP006437.1-201ENST00000641440 3685 ntBASIC1.54□□□□□ -2.16
HIST1H1AQ02539 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
HIST1H1AQ02539 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HIST1H1AQ02539 RNU6-234P-201ENST00000365229 104 ntBASIC1.53□□□□□ -2.16
HIST1H1AQ02539 MIR421-201ENST00000365696 85 ntBASIC1.53□□□□□ -2.16
HIST1H1AQ02539 UBE2V1P2-201ENST00000397758 440 ntBASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AL135786.1-201ENST00000415892 214 ntBASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AC099548.1-201ENST00000421443 426 ntBASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AIMP1P2-201ENST00000425294 312 ntBASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AL035410.1-201ENST00000427409 427 ntBASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AC027124.2-201ENST00000428249 105 ntBASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.53□□□□□ -2.16
HIST1H1AQ02539 UBE2V1P5-201ENST00000440070 405 ntBASIC1.53□□□□□ -2.16
HIST1H1AQ02539 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.53□□□□□ -2.16
HIST1H1AQ02539 HMGN3P1-201ENST00000453847 193 ntBASIC1.53□□□□□ -2.16
HIST1H1AQ02539 MTCO3P11-201ENST00000455103 774 ntBASIC1.53□□□□□ -2.16
HIST1H1AQ02539 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
HIST1H1AQ02539 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AC015724.1-201ENST00000478577 156 ntBASIC1.53□□□□□ -2.16
HIST1H1AQ02539 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.53□□□□□ -2.16
HIST1H1AQ02539 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AC005034.5-201ENST00000604219 466 ntBASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AC138473.1-201ENST00000605717 526 ntBASIC1.53□□□□□ -2.16
HIST1H1AQ02539 AC104307.1-201ENST00000616142 196 ntBASIC1.53□□□□□ -2.16
HIST1H1AQ02539 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.53□□□□□ -2.16
HIST1H1AQ02539 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.53□□□□□ -2.16
HIST1H1AQ02539 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.53□□□□□ -2.17
HIST1H1AQ02539 MTND5P31-201ENST00000419366 1374 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 RNU4-82P-201ENST00000362443 140 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AL024474.1-201ENST00000404655 591 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 RN7SKP32-201ENST00000410167 303 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 RNA5SP489-201ENST00000410986 109 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 SNORD56-201ENST00000413522 71 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 HMGN2P19-201ENST00000425149 265 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AL356320.1-201ENST00000429616 163 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.52□□□□□ -2.17
HIST1H1AQ02539 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HIST1H1AQ02539 USP9YP8-201ENST00000441913 500 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 CBWD4P-201ENST00000445695 655 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AL353705.4-201ENST00000449661 238 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.52□□□□□ -2.17
HIST1H1AQ02539 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.52□□□□□ -2.17
HIST1H1AQ02539 Z82190.1-201ENST00000454534 490 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AC068781.1-201ENST00000488231 618 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AC098799.1-201ENST00000504752 800 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AC112518.2-201ENST00000508565 425 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AC091965.2-201ENST00000512324 613 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AC006499.2-201ENST00000513470 337 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AC017037.2-201ENST00000513850 890 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AC022447.1-201ENST00000515358 464 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.52□□□□□ -2.17
HIST1H1AQ02539 SNORA31.23-201ENST00000517219 133 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 FAM92A1P1-201ENST00000528023 890 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AP002770.2-201ENST00000543613 532 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.52□□□□□ -2.17
HIST1H1AQ02539 CYCSP2-201ENST00000558168 301 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AL049838.1-201ENST00000563647 981 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 MIR4529-201ENST00000578110 78 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 MIR4672-201ENST00000583126 81 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.52□□□□□ -2.17
HIST1H1AQ02539 CR589904.2-201ENST00000612533 440 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 Y_RNA.783-201ENST00000613546 102 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AL590099.1-201ENST00000615276 138 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AC017104.5-201ENST00000637647 639 ntBASIC1.52□□□□□ -2.17
HIST1H1AQ02539 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HIST1H1AQ02539 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HIST1H1AQ02539 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
HIST1H1AQ02539 AC130650.2-201ENST00000618736 2403 ntBASIC1.51□□□□□ -2.17
HIST1H1AQ02539 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AC004520.1-201ENST00000608362 1413 ntBASIC1.51□□□□□ -2.17
HIST1H1AQ02539 RNU6-1155P-201ENST00000363554 107 ntBASIC1.51□□□□□ -2.17
HIST1H1AQ02539 MIR649-201ENST00000384843 97 ntBASIC1.51□□□□□ -2.17
HIST1H1AQ02539 MIR634-201ENST00000385208 97 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms