Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AP003485.2-201ENST00000623636 610 ntBASIC2.31□□□□□ -2.04
TPM4P67936 AP001002.2-201ENST00000625137 386 ntBASIC2.31□□□□□ -2.04
TPM4P67936 MFSD8-213ENST00000641134 1327 ntBASIC2.31□□□□□ -2.04
TPM4P67936 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.31□□□□□ -2.04
TPM4P67936 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
TPM4P67936 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.3□□□□□ -2.04
TPM4P67936 FAM133CP-201ENST00000332869 704 ntBASIC2.3□□□□□ -2.04
TPM4P67936 SNORA36C-201ENST00000384289 132 ntBASIC2.3□□□□□ -2.04
TPM4P67936 RNU6-220P-201ENST00000390919 107 ntBASIC2.3□□□□□ -2.04
TPM4P67936 SNORD23.1-201ENST00000408212 104 ntBASIC2.3□□□□□ -2.04
TPM4P67936 SNORA11.4-201ENST00000408823 129 ntBASIC2.3□□□□□ -2.04
TPM4P67936 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.3□□□□□ -2.04
TPM4P67936 RPL17P12-201ENST00000413391 526 ntBASIC2.3□□□□□ -2.04
TPM4P67936 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
TPM4P67936 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.3□□□□□ -2.04
TPM4P67936 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.3□□□□□ -2.04
TPM4P67936 DDX3P2-201ENST00000446138 111 ntBASIC2.3□□□□□ -2.04
TPM4P67936 AL050341.1-201ENST00000447743 313 ntBASIC2.3□□□□□ -2.04
TPM4P67936 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.3□□□□□ -2.04
TPM4P67936 AC092757.1-201ENST00000467293 467 ntBASIC2.3□□□□□ -2.04
TPM4P67936 RN7SL274P-201ENST00000492268 272 ntBASIC2.3□□□□□ -2.04
TPM4P67936 AC022483.1-201ENST00000514020 567 ntBASIC2.3□□□□□ -2.04
TPM4P67936 AC022634.1-201ENST00000520765 532 ntBASIC2.3□□□□□ -2.04
TPM4P67936 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.3□□□□□ -2.04
TPM4P67936 AC087465.1-201ENST00000560574 245 ntBASIC2.3□□□□□ -2.04
TPM4P67936 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.3□□□□□ -2.04
TPM4P67936 AC106734.1-201ENST00000568646 663 ntBASIC2.3□□□□□ -2.04
TPM4P67936 OR4K8P-201ENST00000578842 1048 ntBASIC2.3□□□□□ -2.04
TPM4P67936 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.3□□□□□ -2.04
TPM4P67936 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.3□□□□□ -2.04
TPM4P67936 AL022067.1-201ENST00000602426 454 ntBASIC2.3□□□□□ -2.04
TPM4P67936 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.3□□□□□ -2.04
TPM4P67936 AC239803.2-201ENST00000610161 430 ntBASIC2.3□□□□□ -2.04
TPM4P67936 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.3□□□□□ -2.04
TPM4P67936 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.3□□□□□ -2.04
TPM4P67936 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.3□□□□□ -2.04
TPM4P67936 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.3□□□□□ -2.04
TPM4P67936 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
TPM4P67936 CENPCP1-201ENST00000533085 2578 ntBASIC2.29□□□□□ -2.04
TPM4P67936 AC080128.1-201ENST00000474389 1917 ntBASIC2.29□□□□□ -2.04
TPM4P67936 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
TPM4P67936 MTND4P27-201ENST00000450813 1354 ntBASIC2.29□□□□□ -2.04
TPM4P67936 FTLP6-201ENST00000355274 422 ntBASIC2.29□□□□□ -2.04
TPM4P67936 RNU6-878P-201ENST00000384578 110 ntBASIC2.29□□□□□ -2.04
TPM4P67936 SNORD116-23-201ENST00000384645 92 ntBASIC2.29□□□□□ -2.04
TPM4P67936 MIR491-201ENST00000384877 84 ntBASIC2.29□□□□□ -2.04
TPM4P67936 RNU6-1328P-201ENST00000410938 106 ntBASIC2.29□□□□□ -2.04
TPM4P67936 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.29□□□□□ -2.04
TPM4P67936 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.29□□□□□ -2.04
TPM4P67936 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.29□□□□□ -2.04
TPM4P67936 THAP5P1-201ENST00000439089 262 ntBASIC2.29□□□□□ -2.04
TPM4P67936 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.29□□□□□ -2.04
TPM4P67936 HIGD1AP2-201ENST00000446367 280 ntBASIC2.29□□□□□ -2.04
TPM4P67936 MTND5P8-201ENST00000449817 1083 ntBASIC2.29□□□□□ -2.04
TPM4P67936 MTATP6P7-201ENST00000453315 681 ntBASIC2.29□□□□□ -2.04
TPM4P67936 RPL32P14-201ENST00000463196 378 ntBASIC2.29□□□□□ -2.04
TPM4P67936 COL6A4P2-205ENST00000509855 506 ntBASIC2.29□□□□□ -2.04
TPM4P67936 AC048346.1-201ENST00000510247 144 ntBASIC2.29□□□□□ -2.04
TPM4P67936 SNORA48.10-201ENST00000516965 160 ntBASIC2.29□□□□□ -2.04
TPM4P67936 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.29□□□□□ -2.04
TPM4P67936 AC008127.2-201ENST00000549925 1075 ntBASIC2.29□□□□□ -2.04
TPM4P67936 SNRPGP18-201ENST00000553000 214 ntBASIC2.29□□□□□ -2.04
TPM4P67936 AL391261.3-201ENST00000557194 520 ntBASIC2.29□□□□□ -2.04
TPM4P67936 NIFKP8-201ENST00000560500 874 ntBASIC2.29□□□□□ -2.04
TPM4P67936 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.29□□□□□ -2.04
TPM4P67936 AC026790.2-201ENST00000606282 430 ntBASIC2.29□□□□□ -2.04
TPM4P67936 AC120053.1-201ENST00000607706 736 ntBASIC2.29□□□□□ -2.04
TPM4P67936 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.29□□□□□ -2.04
TPM4P67936 TUG1_1.1-201ENST00000610654 145 ntBASIC2.29□□□□□ -2.04
TPM4P67936 KPNA2P1-201ENST00000458289 1591 ntBASIC2.28□□□□□ -2.04
TPM4P67936 RNU5A-1-201ENST00000362698 116 ntBASIC2.28□□□□□ -2.04
TPM4P67936 SNORD56.4-201ENST00000363883 71 ntBASIC2.28□□□□□ -2.04
TPM4P67936 RPS4XP8-201ENST00000402039 771 ntBASIC2.28□□□□□ -2.04
TPM4P67936 SUMO2P12-201ENST00000405924 140 ntBASIC2.28□□□□□ -2.04
TPM4P67936 NPM1P11-201ENST00000417106 855 ntBASIC2.28□□□□□ -2.04
TPM4P67936 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.28□□□□□ -2.04
TPM4P67936 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.28□□□□□ -2.04
TPM4P67936 PSMA6P3-201ENST00000428242 164 ntBASIC2.28□□□□□ -2.04
TPM4P67936 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.28□□□□□ -2.04
TPM4P67936 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.28□□□□□ -2.04
TPM4P67936 HSPE1P6-201ENST00000479457 291 ntBASIC2.28□□□□□ -2.04
TPM4P67936 RPS27P21-201ENST00000486977 252 ntBASIC2.28□□□□□ -2.04
TPM4P67936 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TPM4P67936 COX7A2P2-201ENST00000505291 250 ntBASIC2.28□□□□□ -2.04
TPM4P67936 AC114786.4-201ENST00000508771 728 ntBASIC2.28□□□□□ -2.04
TPM4P67936 AC114797.1-201ENST00000514003 728 ntBASIC2.28□□□□□ -2.04
TPM4P67936 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.28□□□□□ -2.04
TPM4P67936 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.28□□□□□ -2.04
TPM4P67936 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.28□□□□□ -2.04
TPM4P67936 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.28□□□□□ -2.04
TPM4P67936 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.28□□□□□ -2.04
TPM4P67936 AC093510.2-201ENST00000562820 896 ntBASIC2.28□□□□□ -2.04
TPM4P67936 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.28□□□□□ -2.04
TPM4P67936 AL033523.1-201ENST00000605153 153 ntBASIC2.28□□□□□ -2.04
TPM4P67936 AL031601.2-202ENST00000622650 282 ntBASIC2.28□□□□□ -2.04
TPM4P67936 AC010329.5-201ENST00000623497 2174 ntBASIC2.27□□□□□ -2.05
TPM4P67936 AC007785.2-201ENST00000598627 1916 ntBASIC2.27□□□□□ -2.05
TPM4P67936 SNORA5B-201ENST00000363786 132 ntBASIC2.27□□□□□ -2.05
TPM4P67936 SNORA80A-201ENST00000363922 136 ntBASIC2.27□□□□□ -2.05
TPM4P67936 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms