Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.54□□□□□ -2.16
UBA52P62987 SCARNA17.1-201ENST00000516211 143 ntBASIC1.54□□□□□ -2.16
UBA52P62987 SCARNA17.2-201ENST00000516334 143 ntBASIC1.54□□□□□ -2.16
UBA52P62987 AP001804.3-201ENST00000525146 880 ntBASIC1.54□□□□□ -2.16
UBA52P62987 CASP1P1-201ENST00000526345 212 ntBASIC1.54□□□□□ -2.16
UBA52P62987 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.54□□□□□ -2.16
UBA52P62987 MIR5089-201ENST00000580047 84 ntBASIC1.54□□□□□ -2.16
UBA52P62987 SCARNA17.4-201ENST00000614296 143 ntBASIC1.54□□□□□ -2.16
UBA52P62987 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
UBA52P62987 AL360181.4-201ENST00000621752 134 ntBASIC1.54□□□□□ -2.16
UBA52P62987 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.54□□□□□ -2.16
UBA52P62987 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
UBA52P62987 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
UBA52P62987 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.54□□□□□ -2.16
UBA52P62987 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
UBA52P62987 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
UBA52P62987 RNA5SP190-201ENST00000365222 118 ntBASIC1.53□□□□□ -2.16
UBA52P62987 FGF7P8-201ENST00000402994 292 ntBASIC1.53□□□□□ -2.16
UBA52P62987 SNORD56-201ENST00000413522 71 ntBASIC1.53□□□□□ -2.16
UBA52P62987 AC008173.1-201ENST00000418901 264 ntBASIC1.53□□□□□ -2.16
UBA52P62987 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.53□□□□□ -2.16
UBA52P62987 TMEM167AP1-201ENST00000423409 219 ntBASIC1.53□□□□□ -2.16
UBA52P62987 AC004022.1-201ENST00000447766 1066 ntBASIC1.53□□□□□ -2.16
UBA52P62987 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.53□□□□□ -2.16
UBA52P62987 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.53□□□□□ -2.16
UBA52P62987 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.53□□□□□ -2.16
UBA52P62987 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.53□□□□□ -2.16
UBA52P62987 SNORA25.15-201ENST00000516487 89 ntBASIC1.53□□□□□ -2.16
UBA52P62987 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.53□□□□□ -2.16
UBA52P62987 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.53□□□□□ -2.16
UBA52P62987 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.53□□□□□ -2.16
UBA52P62987 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.53□□□□□ -2.16
UBA52P62987 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.53□□□□□ -2.16
UBA52P62987 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
UBA52P62987 AL109918.3-201ENST00000603072 338 ntBASIC1.53□□□□□ -2.16
UBA52P62987 AL355812.1-201ENST00000603215 216 ntBASIC1.53□□□□□ -2.16
UBA52P62987 AC090525.3-201ENST00000605601 189 ntBASIC1.53□□□□□ -2.16
UBA52P62987 AL359715.4-201ENST00000606629 1436 ntBASIC1.53□□□□□ -2.16
UBA52P62987 snoU13.31-201ENST00000607291 104 ntBASIC1.53□□□□□ -2.16
UBA52P62987 AC010678.1-201ENST00000614118 713 ntBASIC1.53□□□□□ -2.16
UBA52P62987 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.53□□□□□ -2.16
UBA52P62987 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.53□□□□□ -2.16
UBA52P62987 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.52□□□□□ -2.17
UBA52P62987 MIR378A-201ENST00000362177 66 ntBASIC1.52□□□□□ -2.17
UBA52P62987 SNORD48-201ENST00000364953 64 ntBASIC1.52□□□□□ -2.17
UBA52P62987 SNORA17.3-201ENST00000391159 129 ntBASIC1.52□□□□□ -2.17
UBA52P62987 RNA5SP354-201ENST00000391247 136 ntBASIC1.52□□□□□ -2.17
UBA52P62987 AC003989.2-201ENST00000440224 169 ntBASIC1.52□□□□□ -2.17
UBA52P62987 TRGVB-201ENST00000453257 471 ntBASIC1.52□□□□□ -2.17
UBA52P62987 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.52□□□□□ -2.17
UBA52P62987 AC092798.1-201ENST00000458542 409 ntBASIC1.52□□□□□ -2.17
UBA52P62987 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.52□□□□□ -2.17
UBA52P62987 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.52□□□□□ -2.17
UBA52P62987 MLLT10P2-201ENST00000506434 249 ntBASIC1.52□□□□□ -2.17
UBA52P62987 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
UBA52P62987 SETP7-201ENST00000552169 453 ntBASIC1.52□□□□□ -2.17
UBA52P62987 AC087481.2-201ENST00000565492 330 ntBASIC1.52□□□□□ -2.17
UBA52P62987 MIR4419B-201ENST00000577260 68 ntBASIC1.52□□□□□ -2.17
UBA52P62987 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC1.52□□□□□ -2.17
UBA52P62987 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.52□□□□□ -2.17
UBA52P62987 AL161629.2-201ENST00000615347 275 ntBASIC1.52□□□□□ -2.17
UBA52P62987 AC025588.4-201ENST00000615802 908 ntBASIC1.52□□□□□ -2.17
UBA52P62987 AC012150.2-201ENST00000621300 544 ntBASIC1.52□□□□□ -2.17
UBA52P62987 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.52□□□□□ -2.17
UBA52P62987 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.51□□□□□ -2.17
UBA52P62987 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
UBA52P62987 RNU6-997P-201ENST00000384725 107 ntBASIC1.51□□□□□ -2.17
UBA52P62987 U3.20-201ENST00000390909 217 ntBASIC1.51□□□□□ -2.17
UBA52P62987 SFR1P1-201ENST00000403720 688 ntBASIC1.51□□□□□ -2.17
UBA52P62987 RNU2-17P-201ENST00000410290 190 ntBASIC1.51□□□□□ -2.17
UBA52P62987 AL357078.2-201ENST00000416486 427 ntBASIC1.51□□□□□ -2.17
UBA52P62987 AL365496.1-201ENST00000426885 215 ntBASIC1.51□□□□□ -2.17
UBA52P62987 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.51□□□□□ -2.17
UBA52P62987 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.51□□□□□ -2.17
UBA52P62987 SNORD13-201ENST00000459299 104 ntBASIC1.51□□□□□ -2.17
UBA52P62987 AC105252.1-201ENST00000503089 286 ntBASIC1.51□□□□□ -2.17
UBA52P62987 AC011352.3-201ENST00000505162 593 ntBASIC1.51□□□□□ -2.17
UBA52P62987 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.51□□□□□ -2.17
UBA52P62987 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.51□□□□□ -2.17
UBA52P62987 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.51□□□□□ -2.17
UBA52P62987 AC090666.1-201ENST00000578241 445 ntBASIC1.51□□□□□ -2.17
UBA52P62987 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
UBA52P62987 MIR4781-201ENST00000585250 76 ntBASIC1.51□□□□□ -2.17
UBA52P62987 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.51□□□□□ -2.17
UBA52P62987 BNIP3P8-201ENST00000597863 560 ntBASIC1.51□□□□□ -2.17
UBA52P62987 SNRPGP19-201ENST00000603826 189 ntBASIC1.51□□□□□ -2.17
UBA52P62987 AC004908.2-201ENST00000609090 574 ntBASIC1.51□□□□□ -2.17
UBA52P62987 AL161423.1-201ENST00000613700 262 ntBASIC1.51□□□□□ -2.17
UBA52P62987 AC109809.1-201ENST00000619665 545 ntBASIC1.51□□□□□ -2.17
UBA52P62987 AC084768.2-201ENST00000622736 221 ntBASIC1.51□□□□□ -2.17
UBA52P62987 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.51□□□□□ -2.17
UBA52P62987 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.51□□□□□ -2.17
UBA52P62987 AC087359.1-201ENST00000508335 1740 ntBASIC1.51□□□□□ -2.17
UBA52P62987 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
UBA52P62987 AL022578.1-201ENST00000439330 1433 ntBASIC1.5□□□□□ -2.17
UBA52P62987 MTCO1P4-201ENST00000520516 1409 ntBASIC1.5□□□□□ -2.17
UBA52P62987 AC011477.1-204ENST00000623416 1325 ntBASIC1.5□□□□□ -2.17
UBA52P62987 Y_RNA.226-201ENST00000364337 114 ntBASIC1.5□□□□□ -2.17
UBA52P62987 AL359385.1-201ENST00000456509 365 ntBASIC1.5□□□□□ -2.17
UBA52P62987 MTAPP1-201ENST00000489154 819 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms