Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RPS4XP62701 RNY4P24-201ENST00000362735 96 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 RNU6-660P-201ENST00000364566 109 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 SNORA23-201ENST00000365128 182 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RPS4XP62701 SNORA46-201ENST00000384762 135 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 UBA52P6-201ENST00000399822 382 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 AL357075.1-201ENST00000404107 726 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 RNA5SP38-201ENST00000410750 119 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 AC063979.1-201ENST00000415539 377 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 AC005005.2-201ENST00000420779 380 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 AC011233.1-201ENST00000422812 283 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 AC008850.1-201ENST00000427546 362 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 LARP1BP3-201ENST00000437229 869 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 MTCYBP39-201ENST00000437562 491 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.85□□□□□ -1.95
RPS4XP62701 AL831737.1-201ENST00000441288 271 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.85□□□□□ -1.95
RPS4XP62701 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.85□□□□□ -1.95
RPS4XP62701 AL162389.1-201ENST00000449233 177 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 RPL36AP33-201ENST00000450395 310 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.85□□□□□ -1.95
RPS4XP62701 ATG12P2-201ENST00000456830 416 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.85□□□□□ -1.95
RPS4XP62701 AP002884.2-201ENST00000471647 395 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 RPS3AP43-201ENST00000479743 781 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 RPL30P5-201ENST00000494923 336 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 SNORA31.1-201ENST00000515993 133 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 SNORA31.5-201ENST00000516190 133 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 CASP1P1-201ENST00000526345 212 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RPS4XP62701 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.85□□□□□ -1.95
RPS4XP62701 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.85□□□□□ -1.95
RPS4XP62701 MIR4307-201ENST00000582802 84 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.85□□□□□ -1.95
RPS4XP62701 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.85□□□□□ -1.95
RPS4XP62701 AC099778.2-201ENST00000610904 211 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.85□□□□□ -1.95
RPS4XP62701 TUG1_2.1-201ENST00000614234 87 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 AC012150.2-201ENST00000621300 544 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 AC027309.3-201ENST00000623419 351 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 ZNF826P-207ENST00000622273 1910 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.85□□□□□ -1.95
RPS4XP62701 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.85□□□□□ -1.95
RPS4XP62701 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.85□□□□□ -1.95
RPS4XP62701 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.84□□□□□ -1.95
RPS4XP62701 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.84□□□□□ -1.95
RPS4XP62701 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.84□□□□□ -1.95
RPS4XP62701 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
RPS4XP62701 AC092125.1-201ENST00000562568 1995 ntBASIC2.84□□□□□ -1.95
RPS4XP62701 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.84□□□□□ -1.95
RPS4XP62701 RPL21P3-201ENST00000395517 478 ntBASIC2.84□□□□□ -1.95
RPS4XP62701 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.84□□□□□ -1.95
RPS4XP62701 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.84□□□□□ -1.95
RPS4XP62701 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.84□□□□□ -1.95
RPS4XP62701 TAAR7P-201ENST00000436141 242 ntBASIC2.84□□□□□ -1.95
RPS4XP62701 FTH1P1-201ENST00000437933 532 ntBASIC2.84□□□□□ -1.95
RPS4XP62701 AC009237.8-201ENST00000445492 379 ntBASIC2.84□□□□□ -1.95
RPS4XP62701 Z75741.1-201ENST00000446793 314 ntBASIC2.84□□□□□ -1.95
RPS4XP62701 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.84□□□□□ -1.95
RPS4XP62701 AC146507.2-201ENST00000460608 476 ntBASIC2.84□□□□□ -1.95
RPS4XP62701 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.84□□□□□ -1.95
RPS4XP62701 AC109925.1-201ENST00000478069 331 ntBASIC2.84□□□□□ -1.95
RPS4XP62701 RPL30P14-201ENST00000482744 348 ntBASIC2.84□□□□□ -1.95
RPS4XP62701 AL049874.1-201ENST00000489560 388 ntBASIC2.84□□□□□ -1.95
RPS4XP62701 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.84□□□□□ -1.95
RPS4XP62701 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RPS4XP62701 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.84□□□□□ -1.95
RPS4XP62701 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.84□□□□□ -1.95
RPS4XP62701 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.84□□□□□ -1.95
RPS4XP62701 AC119751.5-201ENST00000514077 770 ntBASIC2.84□□□□□ -1.95
RPS4XP62701 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.84□□□□□ -1.95
RPS4XP62701 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.84□□□□□ -1.95
RPS4XP62701 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.84□□□□□ -1.95
RPS4XP62701 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.84□□□□□ -1.95
RPS4XP62701 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.84□□□□□ -1.95
RPS4XP62701 AC007954.1-201ENST00000554198 494 ntBASIC2.84□□□□□ -1.95
RPS4XP62701 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RPS4XP62701 OR4H12P-201ENST00000556269 907 ntBASIC2.84□□□□□ -1.95
RPS4XP62701 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.84□□□□□ -1.95
RPS4XP62701 RPL23AP84-201ENST00000571193 464 ntBASIC2.84□□□□□ -1.95
RPS4XP62701 AP000403.1-201ENST00000603349 851 ntBASIC2.84□□□□□ -1.95
RPS4XP62701 AL139344.1-201ENST00000605228 195 ntBASIC2.84□□□□□ -1.95
RPS4XP62701 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
RPS4XP62701 AL365361.1-201ENST00000566942 3481 ntBASIC2.84□□□□□ -1.95
RPS4XP62701 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
RPS4XP62701 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
RPS4XP62701 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.84□□□□□ -1.96
RPS4XP62701 MAPK10-322ENST00000641485 4530 ntBASIC2.84□□□□□ -1.96
RPS4XP62701 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
RPS4XP62701 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
RPS4XP62701 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
RPS4XP62701 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.83□□□□□ -1.96
RPS4XP62701 OR4G2P-202ENST00000641004 1759 ntBASIC2.83□□□□□ -1.96
RPS4XP62701 AL109755.1-201ENST00000401791 649 ntBASIC2.83□□□□□ -1.96
RPS4XP62701 MTND4P20-201ENST00000424125 869 ntBASIC2.83□□□□□ -1.96
RPS4XP62701 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.83□□□□□ -1.96
RPS4XP62701 AL590383.1-201ENST00000428602 75 ntBASIC2.83□□□□□ -1.96
RPS4XP62701 AC109583.1-201ENST00000432156 268 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms