Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
ACTBP60709 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.06□□□□□ -2.08
ACTBP60709 USP12PX-201ENST00000432383 1057 ntBASIC2.06□□□□□ -2.08
ACTBP60709 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.06□□□□□ -2.08
ACTBP60709 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.06□□□□□ -2.08
ACTBP60709 GPM6BP3-201ENST00000442797 145 ntBASIC2.06□□□□□ -2.08
ACTBP60709 USP9YP34-201ENST00000453983 808 ntBASIC2.06□□□□□ -2.08
ACTBP60709 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.06□□□□□ -2.08
ACTBP60709 AC107626.1-201ENST00000471084 183 ntBASIC2.06□□□□□ -2.08
ACTBP60709 RPL23AP45-201ENST00000476406 468 ntBASIC2.06□□□□□ -2.08
ACTBP60709 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.06□□□□□ -2.08
ACTBP60709 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.06□□□□□ -2.08
ACTBP60709 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.06□□□□□ -2.08
ACTBP60709 TTC39CP1-201ENST00000512513 755 ntBASIC2.06□□□□□ -2.08
ACTBP60709 AC022447.1-201ENST00000515358 464 ntBASIC2.06□□□□□ -2.08
ACTBP60709 RNA5SP356-201ENST00000515972 94 ntBASIC2.06□□□□□ -2.08
ACTBP60709 AC027309.2-201ENST00000520566 192 ntBASIC2.06□□□□□ -2.08
ACTBP60709 AC022634.1-201ENST00000520765 532 ntBASIC2.06□□□□□ -2.08
ACTBP60709 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.06□□□□□ -2.08
ACTBP60709 AP005902.1-201ENST00000521358 186 ntBASIC2.06□□□□□ -2.08
ACTBP60709 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.06□□□□□ -2.08
ACTBP60709 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.06□□□□□ -2.08
ACTBP60709 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.06□□□□□ -2.08
ACTBP60709 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.06□□□□□ -2.08
ACTBP60709 RPL23AP84-201ENST00000571193 464 ntBASIC2.06□□□□□ -2.08
ACTBP60709 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.06□□□□□ -2.08
ACTBP60709 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.06□□□□□ -2.08
ACTBP60709 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.06□□□□□ -2.08
ACTBP60709 AL022067.1-201ENST00000602426 454 ntBASIC2.06□□□□□ -2.08
ACTBP60709 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.06□□□□□ -2.08
ACTBP60709 MIR6852-201ENST00000621699 66 ntBASIC2.06□□□□□ -2.08
ACTBP60709 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.06□□□□□ -2.08
ACTBP60709 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
ACTBP60709 AL049641.1-201ENST00000441055 1948 ntBASIC2.06□□□□□ -2.08
ACTBP60709 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
ACTBP60709 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
ACTBP60709 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
ACTBP60709 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
ACTBP60709 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
ACTBP60709 MIR16-2-201ENST00000362117 81 ntBASIC2.05□□□□□ -2.08
ACTBP60709 MIR21-201ENST00000362134 72 ntBASIC2.05□□□□□ -2.08
ACTBP60709 RNU6-657P-201ENST00000383904 107 ntBASIC2.05□□□□□ -2.08
ACTBP60709 Y_RNA.500-201ENST00000384466 111 ntBASIC2.05□□□□□ -2.08
ACTBP60709 RNU6-878P-201ENST00000384578 110 ntBASIC2.05□□□□□ -2.08
ACTBP60709 AP002784.2-201ENST00000397300 549 ntBASIC2.05□□□□□ -2.08
ACTBP60709 U3.40-201ENST00000408706 208 ntBASIC2.05□□□□□ -2.08
ACTBP60709 RNA5SP184-201ENST00000411071 108 ntBASIC2.05□□□□□ -2.08
ACTBP60709 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.05□□□□□ -2.08
ACTBP60709 BOLA3P4-201ENST00000418151 400 ntBASIC2.05□□□□□ -2.08
ACTBP60709 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.05□□□□□ -2.08
ACTBP60709 NDUFB4P7-201ENST00000423198 363 ntBASIC2.05□□□□□ -2.08
ACTBP60709 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.05□□□□□ -2.08
ACTBP60709 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.05□□□□□ -2.08
ACTBP60709 Z93242.1-201ENST00000427102 353 ntBASIC2.05□□□□□ -2.08
ACTBP60709 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.05□□□□□ -2.08
ACTBP60709 GXYLT1P1-201ENST00000446657 490 ntBASIC2.05□□□□□ -2.08
ACTBP60709 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.05□□□□□ -2.08
ACTBP60709 AC091860.1-201ENST00000505723 432 ntBASIC2.05□□□□□ -2.08
ACTBP60709 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.05□□□□□ -2.08
ACTBP60709 XKRY-201ENST00000510392 1100 ntBASIC2.05□□□□□ -2.08
ACTBP60709 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.05□□□□□ -2.08
ACTBP60709 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.05□□□□□ -2.08
ACTBP60709 AC078814.3-201ENST00000553036 491 ntBASIC2.05□□□□□ -2.08
ACTBP60709 MTCYBP27-201ENST00000555160 670 ntBASIC2.05□□□□□ -2.08
ACTBP60709 AC135628.1-201ENST00000568867 534 ntBASIC2.05□□□□□ -2.08
ACTBP60709 AC105137.2-201ENST00000569073 466 ntBASIC2.05□□□□□ -2.08
ACTBP60709 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.05□□□□□ -2.08
ACTBP60709 OR4K7P-201ENST00000580232 945 ntBASIC2.05□□□□□ -2.08
ACTBP60709 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.05□□□□□ -2.08
ACTBP60709 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.05□□□□□ -2.08
ACTBP60709 AC078899.2-201ENST00000595282 212 ntBASIC2.05□□□□□ -2.08
ACTBP60709 AC021749.1-201ENST00000604322 607 ntBASIC2.05□□□□□ -2.08
ACTBP60709 AC091946.2-201ENST00000606105 291 ntBASIC2.05□□□□□ -2.08
ACTBP60709 AC012467.1-201ENST00000607740 256 ntBASIC2.05□□□□□ -2.08
ACTBP60709 MIR8084-201ENST00000614105 89 ntBASIC2.05□□□□□ -2.08
ACTBP60709 AC090132.2-201ENST00000615881 347 ntBASIC2.05□□□□□ -2.08
ACTBP60709 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.05□□□□□ -2.08
ACTBP60709 AL031601.2-202ENST00000622650 282 ntBASIC2.05□□□□□ -2.08
ACTBP60709 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
ACTBP60709 AC062016.1-201ENST00000355719 319 ntBASIC2.04□□□□□ -2.08
ACTBP60709 SNORA3A-201ENST00000364113 130 ntBASIC2.04□□□□□ -2.08
ACTBP60709 RNA5SP37-201ENST00000365420 130 ntBASIC2.04□□□□□ -2.08
ACTBP60709 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.04□□□□□ -2.08
ACTBP60709 Y_RNA.510-201ENST00000384511 114 ntBASIC2.04□□□□□ -2.08
ACTBP60709 RNU2-47P-201ENST00000410649 186 ntBASIC2.04□□□□□ -2.08
ACTBP60709 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.04□□□□□ -2.08
ACTBP60709 TAF13P2-201ENST00000416876 286 ntBASIC2.04□□□□□ -2.08
ACTBP60709 AC027644.1-201ENST00000419595 298 ntBASIC2.04□□□□□ -2.08
ACTBP60709 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.04□□□□□ -2.08
ACTBP60709 HMGN2P38-201ENST00000423806 265 ntBASIC2.04□□□□□ -2.08
ACTBP60709 PSMA6P3-201ENST00000428242 164 ntBASIC2.04□□□□□ -2.08
ACTBP60709 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.04□□□□□ -2.08
ACTBP60709 AL512637.2-201ENST00000431287 1256 ntBASIC2.04□□□□□ -2.08
ACTBP60709 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.04□□□□□ -2.08
ACTBP60709 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.04□□□□□ -2.08
ACTBP60709 BMI1P1-201ENST00000445879 941 ntBASIC2.04□□□□□ -2.08
ACTBP60709 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.04□□□□□ -2.08
ACTBP60709 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.04□□□□□ -2.08
ACTBP60709 UBE2DNL-203ENST00000474922 222 ntBASIC2.04□□□□□ -2.08
ACTBP60709 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms