Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CCDC58P2-201ENST00000417131 366 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.41□□□□□ -2.02
CLDN6P56747 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CLDN6P56747 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.41□□□□□ -2.02
CLDN6P56747 HMGN2P3-201ENST00000433603 273 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDN6P56747 TAAR7P-201ENST00000436141 242 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 HMGN2P5-201ENST00000436882 273 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDN6P56747 RNF2P1-201ENST00000442955 1010 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 MRPL50P4-201ENST00000446432 475 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN6P56747 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN6P56747 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN6P56747 MTCO3P11-201ENST00000455103 774 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN6P56747 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN6P56747 MTND4LP3-201ENST00000468320 276 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN6P56747 AL049874.1-201ENST00000489560 388 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN6P56747 AC026414.1-201ENST00000504046 698 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN6P56747 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN6P56747 RNU6-826P-201ENST00000516827 104 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 MTCO3P15-201ENST00000526563 574 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.41□□□□□ -2.02
CLDN6P56747 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN6P56747 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDN6P56747 AL355836.1-201ENST00000555951 870 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN6P56747 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
CLDN6P56747 AMZ2P1-203ENST00000565833 850 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 AC068135.2-201ENST00000569293 1028 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 AC009163.5-201ENST00000575421 637 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 MIR4637-201ENST00000582405 84 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDN6P56747 AL136363.1-201ENST00000605349 337 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN6P56747 AC004696.1-201ENST00000614345 607 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 AC109454.4-201ENST00000623411 649 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 CR381653.2-201ENST00000624041 768 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 AL356094.1-201ENST00000624663 1212 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDN6P56747 MIR1322-201ENST00000638013 71 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 AC006927.2-201ENST00000639256 389 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLDN6P56747 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
CLDN6P56747 AC092447.7-201ENST00000422212 1621 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CLDN6P56747 Z82195.2-201ENST00000612348 18351 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.4□□□□□ -2.03
CLDN6P56747 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CLDN6P56747 RNU1-105P-201ENST00000363470 161 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 RNU5B-4P-201ENST00000363508 111 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CLDN6P56747 RNU6-76P-201ENST00000384060 104 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 MIR627-201ENST00000384979 97 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 RNA5SP210-201ENST00000391034 120 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 AL356057.2-201ENST00000403318 432 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 RNU6-193P-201ENST00000410977 107 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.4□□□□□ -2.03
CLDN6P56747 AC009414.1-201ENST00000427200 443 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 AL356867.1-201ENST00000429623 299 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 AL512844.2-201ENST00000433990 593 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 RPL36AP6-201ENST00000435770 321 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 AC011816.1-201ENST00000441346 546 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CLDN6P56747 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.4□□□□□ -2.03
CLDN6P56747 AC090453.1-201ENST00000495560 436 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.4□□□□□ -2.03
CLDN6P56747 AC114322.1-201ENST00000506771 926 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 AC234781.5-201ENST00000508429 271 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 RNA5SP281-201ENST00000516504 135 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CLDN6P56747 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.4□□□□□ -2.03
CLDN6P56747 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CLDN6P56747 AC104417.1-201ENST00000523974 751 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.4□□□□□ -2.03
CLDN6P56747 AP003066.2-201ENST00000529375 555 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.4□□□□□ -2.03
CLDN6P56747 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.4□□□□□ -2.03
CLDN6P56747 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.4□□□□□ -2.03
CLDN6P56747 MIR5708-201ENST00000579723 85 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 AC013553.2-201ENST00000604244 589 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 AC080013.4-201ENST00000607624 649 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 AL161734.1-201ENST00000609720 557 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 AC004852.3-201ENST00000614131 326 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 AC005832.2-201ENST00000538921 1430 ntBASIC2.4□□□□□ -2.03
CLDN6P56747 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLDN6P56747 RNU1-109P-201ENST00000383960 147 ntBASIC2.39□□□□□ -2.03
CLDN6P56747 RNU6-1035P-201ENST00000384477 107 ntBASIC2.39□□□□□ -2.03
CLDN6P56747 MIR767-201ENST00000390228 109 ntBASIC2.39□□□□□ -2.03
CLDN6P56747 AL450338.1-201ENST00000407987 512 ntBASIC2.39□□□□□ -2.03
CLDN6P56747 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.39□□□□□ -2.03
CLDN6P56747 RN7SKP192-201ENST00000411291 327 ntBASIC2.39□□□□□ -2.03
CLDN6P56747 AC007064.1-201ENST00000412238 351 ntBASIC2.39□□□□□ -2.03
CLDN6P56747 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms