Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.35□□□□□ -1.71
GFRA1P56159 AC005154.2-201ENST00000438110 379 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 AL356981.1-201ENST00000454879 684 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 CYCSP34-201ENST00000458172 304 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 snoU13.4-201ENST00000458916 104 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 MIR2053-201ENST00000459295 91 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 RPS29P22-201ENST00000472363 168 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 HMGB1P30-201ENST00000492455 606 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 MTND3P25-201ENST00000509243 135 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 AC008716.1-201ENST00000511084 513 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.35□□□□□ -1.71
GFRA1P56159 RNA5SP471-201ENST00000516971 106 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 RNU6-1315P-201ENST00000517187 99 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 ATP5F1P5-201ENST00000526403 760 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.35□□□□□ -1.71
GFRA1P56159 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.35□□□□□ -1.71
GFRA1P56159 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.35□□□□□ -1.71
GFRA1P56159 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.35□□□□□ -1.71
GFRA1P56159 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.35□□□□□ -1.71
GFRA1P56159 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.35□□□□□ -1.71
GFRA1P56159 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.35□□□□□ -1.71
GFRA1P56159 MIR4472-2-201ENST00000582069 67 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 AC098826.3-201ENST00000603823 466 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 NUTF2P8-201ENST00000604593 363 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 AC018462.2-201ENST00000605375 395 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.35□□□□□ -1.71
GFRA1P56159 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
GFRA1P56159 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GFRA1P56159 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
GFRA1P56159 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
GFRA1P56159 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GFRA1P56159 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GFRA1P56159 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
GFRA1P56159 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.34□□□□□ -1.71
GFRA1P56159 TLK1P1-201ENST00000456760 2440 ntBASIC4.34□□□□□ -1.71
GFRA1P56159 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GFRA1P56159 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.34□□□□□ -1.71
GFRA1P56159 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
GFRA1P56159 AP000542.2-201ENST00000623199 6179 ntBASIC4.34□□□□□ -1.71
GFRA1P56159 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
GFRA1P56159 SNORD62.1-201ENST00000362541 86 ntBASIC4.34□□□□□ -1.71
GFRA1P56159 RNU6-1050P-201ENST00000410388 107 ntBASIC4.34□□□□□ -1.71
GFRA1P56159 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.34□□□□□ -1.71
GFRA1P56159 AL590139.1-201ENST00000416267 400 ntBASIC4.34□□□□□ -1.71
GFRA1P56159 AC104333.2-201ENST00000422630 192 ntBASIC4.34□□□□□ -1.71
GFRA1P56159 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.34□□□□□ -1.71
GFRA1P56159 RPS17P8-201ENST00000434525 335 ntBASIC4.34□□□□□ -1.71
GFRA1P56159 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.34□□□□□ -1.71
GFRA1P56159 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.34□□□□□ -1.71
GFRA1P56159 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.34□□□□□ -1.71
GFRA1P56159 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.34□□□□□ -1.71
GFRA1P56159 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.34□□□□□ -1.71
GFRA1P56159 SUMO2P6-201ENST00000505273 288 ntBASIC4.34□□□□□ -1.71
GFRA1P56159 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
GFRA1P56159 RNU6-709P-201ENST00000517257 104 ntBASIC4.34□□□□□ -1.71
GFRA1P56159 AC087369.1-201ENST00000520775 996 ntBASIC4.34□□□□□ -1.71
GFRA1P56159 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GFRA1P56159 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.34□□□□□ -1.71
GFRA1P56159 AC063950.1-201ENST00000552036 308 ntBASIC4.34□□□□□ -1.71
GFRA1P56159 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.34□□□□□ -1.71
GFRA1P56159 MIR5699-201ENST00000578903 90 ntBASIC4.34□□□□□ -1.71
GFRA1P56159 LRRC37A5P-203ENST00000580181 585 ntBASIC4.34□□□□□ -1.71
GFRA1P56159 AC008737.2-201ENST00000599446 118 ntBASIC4.34□□□□□ -1.71
GFRA1P56159 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GFRA1P56159 AC009229.3-201ENST00000608056 282 ntBASIC4.34□□□□□ -1.71
GFRA1P56159 AL161616.1-201ENST00000611867 286 ntBASIC4.34□□□□□ -1.71
GFRA1P56159 AC005344.1-201ENST00000613391 459 ntBASIC4.34□□□□□ -1.71
GFRA1P56159 MIR6780A-201ENST00000615089 68 ntBASIC4.34□□□□□ -1.71
GFRA1P56159 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
GFRA1P56159 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
GFRA1P56159 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.34□□□□□ -1.72
GFRA1P56159 AC104623.2-202ENST00000623477 4002 ntBASIC4.34□□□□□ -1.72
GFRA1P56159 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
GFRA1P56159 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.33□□□□□ -1.72
GFRA1P56159 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GFRA1P56159 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
GFRA1P56159 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GFRA1P56159 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.33□□□□□ -1.72
GFRA1P56159 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GFRA1P56159 AC005183.1-201ENST00000603687 1979 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
GFRA1P56159 AC138393.1-203ENST00000327086 343 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GFRA1P56159 AC117470.1-201ENST00000381974 330 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 RNU6-1179P-201ENST00000384667 107 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
GFRA1P56159 HIGD1AP11-201ENST00000438361 280 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.33□□□□□ -1.72
GFRA1P56159 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.33□□□□□ -1.72
GFRA1P56159 RPS20P22-201ENST00000473700 357 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 AC021146.3-201ENST00000511911 260 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 AC026782.1-201ENST00000512952 449 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 ENPP7P9-201ENST00000514456 627 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 RNU6-1256P-201ENST00000516539 103 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.33□□□□□ -1.72
GFRA1P56159 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.33□□□□□ -1.72
GFRA1P56159 AC005868.1-201ENST00000536421 331 ntBASIC4.33□□□□□ -1.72
GFRA1P56159 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.33□□□□□ -1.72
GFRA1P56159 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms