Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HMGCS2P54868 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.05□□□□□ -1.92
HMGCS2P54868 NUP58P1-201ENST00000502546 1738 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.04□□□□□ -1.92
HMGCS2P54868 GDI2P1-201ENST00000429312 1336 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HMGCS2P54868 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HMGCS2P54868 RNA5SP289-201ENST00000362332 137 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.04□□□□□ -1.92
HMGCS2P54868 RNU6-821P-201ENST00000390995 107 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 RPS4XP7-201ENST00000406274 780 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 AL451074.5-201ENST00000415894 435 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 RPLP0P7-201ENST00000416050 667 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 RPS6P15-201ENST00000431996 751 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 AL354941.1-201ENST00000438600 464 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGCS2P54868 AC010095.1-201ENST00000443543 144 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.04□□□□□ -1.92
HMGCS2P54868 MTND2P19-201ENST00000449129 1012 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGCS2P54868 AL445669.2-201ENST00000454425 421 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 AP004217.1-201ENST00000480579 346 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 RPS3AP22-201ENST00000488297 769 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.04□□□□□ -1.92
HMGCS2P54868 AC114981.1-201ENST00000503897 678 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGCS2P54868 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.04□□□□□ -1.92
HMGCS2P54868 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGCS2P54868 AC010486.2-201ENST00000505572 483 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 AC093281.2-201ENST00000510153 597 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 LTV1P1-201ENST00000510683 1237 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 AC026412.2-201ENST00000512270 1075 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 RNA5SP320-201ENST00000516263 124 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 AC068657.1-201ENST00000520807 306 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGCS2P54868 HSPA8P13-201ENST00000523715 472 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HMGCS2P54868 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HMGCS2P54868 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HMGCS2P54868 ELOCP32-201ENST00000548625 324 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 MRPS36P5-201ENST00000551909 298 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGCS2P54868 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGCS2P54868 AL109653.1-201ENST00000603091 248 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 AC104763.2-201ENST00000604179 382 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 AC007621.1-201ENST00000604544 437 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 AC018714.1-201ENST00000605028 208 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 AC024560.3-201ENST00000608482 349 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 AC025034.2-201ENST00000623264 286 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 AC231657.1-201ENST00000624313 397 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.04□□□□□ -1.92
HMGCS2P54868 MTND2P41-201ENST00000637599 773 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 AC103706.2-201ENST00000638080 240 ntBASIC3.04□□□□□ -1.92
HMGCS2P54868 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
HMGCS2P54868 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.04□□□□□ -1.92
HMGCS2P54868 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGCS2P54868 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.03□□□□□ -1.92
HMGCS2P54868 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGCS2P54868 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HMGCS2P54868 AC093831.2-201ENST00000624393 3427 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 AL590084.2-201ENST00000401481 382 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 CYCSP45-201ENST00000402289 315 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 SNORA3.2-201ENST00000408221 125 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 RNA5SP293-201ENST00000410527 113 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 YPEL5P1-201ENST00000419731 367 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 RPL7P30-201ENST00000420888 709 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGCS2P54868 AL022400.1-201ENST00000423946 935 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 MTND5P25-201ENST00000430499 799 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGCS2P54868 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 RPS29P6-201ENST00000438196 145 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGCS2P54868 MTCYBP34-201ENST00000439552 670 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGCS2P54868 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.03□□□□□ -1.92
HMGCS2P54868 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.03□□□□□ -1.92
HMGCS2P54868 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGCS2P54868 AC005297.2-201ENST00000450430 606 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 AL133217.1-201ENST00000450980 425 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGCS2P54868 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGCS2P54868 USP9YP10-201ENST00000454868 628 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 MTCO3P11-201ENST00000455103 774 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 AL590639.1-201ENST00000456484 337 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 RNU7-136P-201ENST00000458819 69 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.03□□□□□ -1.92
HMGCS2P54868 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGCS2P54868 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGCS2P54868 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.03□□□□□ -1.92
HMGCS2P54868 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGCS2P54868 OR7K1P-201ENST00000546439 926 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.03□□□□□ -1.92
HMGCS2P54868 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGCS2P54868 AC008015.1-201ENST00000555505 465 ntBASIC3.03□□□□□ -1.92
HMGCS2P54868 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms