Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC068276.1-201ENST00000605793 379 ntBASIC3.36□□□□□ -1.87
CLK1P49759 RNU1-30P-201ENST00000606575 163 ntBASIC3.36□□□□□ -1.87
CLK1P49759 Z99129.1-201ENST00000612510 255 ntBASIC3.36□□□□□ -1.87
CLK1P49759 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.36□□□□□ -1.87
CLK1P49759 AL357080.1-201ENST00000617394 239 ntBASIC3.36□□□□□ -1.87
CLK1P49759 AL731566.2-201ENST00000618971 317 ntBASIC3.36□□□□□ -1.87
CLK1P49759 AC025048.6-202ENST00000627667 438 ntBASIC3.36□□□□□ -1.87
CLK1P49759 AC119674.1-207ENST00000641355 633 ntBASIC3.36□□□□□ -1.87
CLK1P49759 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.36□□□□□ -1.87
CLK1P49759 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLK1P49759 AC093536.2-201ENST00000565257 1406 ntBASIC3.36□□□□□ -1.87
CLK1P49759 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.35□□□□□ -1.87
CLK1P49759 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLK1P49759 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.35□□□□□ -1.87
CLK1P49759 FGF7P2-201ENST00000332473 296 ntBASIC3.35□□□□□ -1.87
CLK1P49759 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLK1P49759 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CLK1P49759 RNU6-1180P-201ENST00000364935 107 ntBASIC3.35□□□□□ -1.87
CLK1P49759 RNU6-1215P-201ENST00000384441 102 ntBASIC3.35□□□□□ -1.87
CLK1P49759 Y_RNA.516-201ENST00000384541 124 ntBASIC3.35□□□□□ -1.87
CLK1P49759 SNORA26.7-201ENST00000391288 122 ntBASIC3.35□□□□□ -1.87
CLK1P49759 RN7SKP159-201ENST00000410657 292 ntBASIC3.35□□□□□ -1.87
CLK1P49759 RNA5SP492-201ENST00000411330 114 ntBASIC3.35□□□□□ -1.87
CLK1P49759 AC007899.1-201ENST00000412776 775 ntBASIC3.35□□□□□ -1.87
CLK1P49759 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.35□□□□□ -1.87
CLK1P49759 ELOCP17-201ENST00000414751 326 ntBASIC3.35□□□□□ -1.87
CLK1P49759 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CLK1P49759 MTCO2P5-201ENST00000422621 426 ntBASIC3.35□□□□□ -1.87
CLK1P49759 AL353678.1-201ENST00000422735 741 ntBASIC3.35□□□□□ -1.87
CLK1P49759 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.35□□□□□ -1.87
CLK1P49759 AC007742.1-201ENST00000425789 329 ntBASIC3.35□□□□□ -1.87
CLK1P49759 BX890604.2-201ENST00000427883 474 ntBASIC3.35□□□□□ -1.87
CLK1P49759 AL512649.1-201ENST00000428997 581 ntBASIC3.35□□□□□ -1.87
CLK1P49759 AL365184.2-201ENST00000431139 435 ntBASIC3.35□□□□□ -1.87
CLK1P49759 ELOCP26-201ENST00000436067 329 ntBASIC3.35□□□□□ -1.87
CLK1P49759 TAAR7P-201ENST00000436141 242 ntBASIC3.35□□□□□ -1.87
CLK1P49759 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLK1P49759 RPS29P7-201ENST00000439662 171 ntBASIC3.35□□□□□ -1.87
CLK1P49759 RPL21P2-201ENST00000440049 481 ntBASIC3.35□□□□□ -1.87
CLK1P49759 AL031667.1-201ENST00000440222 725 ntBASIC3.35□□□□□ -1.87
CLK1P49759 RPL26P6-201ENST00000440913 438 ntBASIC3.35□□□□□ -1.87
CLK1P49759 EEF1E1P1-201ENST00000446998 430 ntBASIC3.35□□□□□ -1.87
CLK1P49759 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.35□□□□□ -1.87
CLK1P49759 RNA5SP269-201ENST00000459032 137 ntBASIC3.35□□□□□ -1.87
CLK1P49759 SRRM1P2-201ENST00000464531 1192 ntBASIC3.35□□□□□ -1.87
CLK1P49759 FCF1P3-201ENST00000496394 590 ntBASIC3.35□□□□□ -1.87
CLK1P49759 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.35□□□□□ -1.87
CLK1P49759 MTND2P33-201ENST00000506452 1031 ntBASIC3.35□□□□□ -1.87
CLK1P49759 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.35□□□□□ -1.87
CLK1P49759 AC026801.2-201ENST00000515352 425 ntBASIC3.35□□□□□ -1.87
CLK1P49759 RNU6-583P-201ENST00000516012 92 ntBASIC3.35□□□□□ -1.87
CLK1P49759 RNU6-405P-201ENST00000516637 110 ntBASIC3.35□□□□□ -1.87
CLK1P49759 RNU6-352P-201ENST00000516908 107 ntBASIC3.35□□□□□ -1.87
CLK1P49759 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
CLK1P49759 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.35□□□□□ -1.87
CLK1P49759 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.35□□□□□ -1.87
CLK1P49759 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.35□□□□□ -1.87
CLK1P49759 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
CLK1P49759 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.35□□□□□ -1.87
CLK1P49759 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLK1P49759 MTND1P15-201ENST00000579262 949 ntBASIC3.35□□□□□ -1.87
CLK1P49759 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.35□□□□□ -1.87
CLK1P49759 MIR6130-201ENST00000619419 109 ntBASIC3.35□□□□□ -1.87
CLK1P49759 AC079684.1-201ENST00000621405 437 ntBASIC3.35□□□□□ -1.87
CLK1P49759 AC079228.1-201ENST00000624774 1049 ntBASIC3.35□□□□□ -1.87
CLK1P49759 AP000553.6-201ENST00000641242 118 ntBASIC3.35□□□□□ -1.87
CLK1P49759 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.35□□□□□ -1.87
CLK1P49759 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.35□□□□□ -1.87
CLK1P49759 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.35□□□□□ -1.87
CLK1P49759 AL513302.2-201ENST00000562313 1842 ntBASIC3.35□□□□□ -1.87
CLK1P49759 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.35□□□□□ -1.87
CLK1P49759 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.34□□□□□ -1.87
CLK1P49759 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLK1P49759 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLK1P49759 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLK1P49759 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CLK1P49759 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CLK1P49759 RNU1-75P-201ENST00000347264 129 ntBASIC3.34□□□□□ -1.87
CLK1P49759 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.34□□□□□ -1.87
CLK1P49759 AP002088.1-201ENST00000382740 395 ntBASIC3.34□□□□□ -1.87
CLK1P49759 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLK1P49759 MIR767-201ENST00000390228 109 ntBASIC3.34□□□□□ -1.87
CLK1P49759 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CLK1P49759 AL078595.1-201ENST00000404458 226 ntBASIC3.34□□□□□ -1.87
CLK1P49759 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.34□□□□□ -1.87
CLK1P49759 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CLK1P49759 SPA17P1-201ENST00000416656 452 ntBASIC3.34□□□□□ -1.87
CLK1P49759 HMGB3P20-201ENST00000417997 600 ntBASIC3.34□□□□□ -1.87
CLK1P49759 NDUFB4P7-201ENST00000423198 363 ntBASIC3.34□□□□□ -1.87
CLK1P49759 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.34□□□□□ -1.87
CLK1P49759 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.34□□□□□ -1.87
CLK1P49759 SDCBPP1-201ENST00000440192 890 ntBASIC3.34□□□□□ -1.87
CLK1P49759 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.34□□□□□ -1.87
CLK1P49759 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.34□□□□□ -1.87
CLK1P49759 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.34□□□□□ -1.87
CLK1P49759 MTND2P24-201ENST00000453434 806 ntBASIC3.34□□□□□ -1.87
CLK1P49759 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.34□□□□□ -1.87
CLK1P49759 UBDP1-202ENST00000457888 382 ntBASIC3.34□□□□□ -1.87
CLK1P49759 AC093899.1-201ENST00000457984 376 ntBASIC3.34□□□□□ -1.87
CLK1P49759 RN7SL442P-201ENST00000473804 320 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms