Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC022079.1-201ENST00000621546 602 ntBASIC3.28□□□□□ -1.88
LHX1P48742 AL159972.1-201ENST00000625150 448 ntBASIC3.28□□□□□ -1.88
LHX1P48742 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.28□□□□□ -1.88
LHX1P48742 AC093591.3-201ENST00000634516 308 ntBASIC3.28□□□□□ -1.88
LHX1P48742 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
LHX1P48742 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
LHX1P48742 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LHX1P48742 DEFB108F-201ENST00000344638 222 ntBASIC3.27□□□□□ -1.89
LHX1P48742 MIR22-201ENST00000362190 85 ntBASIC3.27□□□□□ -1.89
LHX1P48742 RNA5SP383-201ENST00000362934 120 ntBASIC3.27□□□□□ -1.89
LHX1P48742 RNU6-525P-201ENST00000363685 104 ntBASIC3.27□□□□□ -1.89
LHX1P48742 U3.11-201ENST00000364476 212 ntBASIC3.27□□□□□ -1.89
LHX1P48742 RNU1-140P-201ENST00000365040 165 ntBASIC3.27□□□□□ -1.89
LHX1P48742 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LHX1P48742 RNU6-432P-201ENST00000384196 109 ntBASIC3.27□□□□□ -1.89
LHX1P48742 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LHX1P48742 MTCYBP36-201ENST00000404146 440 ntBASIC3.27□□□□□ -1.89
LHX1P48742 AP000567.1-201ENST00000406413 156 ntBASIC3.27□□□□□ -1.89
LHX1P48742 Z92545.1-201ENST00000411782 234 ntBASIC3.27□□□□□ -1.89
LHX1P48742 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.27□□□□□ -1.89
LHX1P48742 PPP1R11P2-201ENST00000423543 382 ntBASIC3.27□□□□□ -1.89
LHX1P48742 RPL35AP22-201ENST00000436855 335 ntBASIC3.27□□□□□ -1.89
LHX1P48742 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.27□□□□□ -1.89
LHX1P48742 UBE2D3P4-201ENST00000441973 436 ntBASIC3.27□□□□□ -1.89
LHX1P48742 RPS12P18-201ENST00000442381 270 ntBASIC3.27□□□□□ -1.89
LHX1P48742 TPT1P14-201ENST00000448018 505 ntBASIC3.27□□□□□ -1.89
LHX1P48742 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.27□□□□□ -1.89
LHX1P48742 RPS23P3-201ENST00000470993 430 ntBASIC3.27□□□□□ -1.89
LHX1P48742 MTND3P7-201ENST00000474435 343 ntBASIC3.27□□□□□ -1.89
LHX1P48742 AC068724.1-201ENST00000487100 792 ntBASIC3.27□□□□□ -1.89
LHX1P48742 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.27□□□□□ -1.89
LHX1P48742 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.27□□□□□ -1.89
LHX1P48742 RNU1-143P-201ENST00000516296 146 ntBASIC3.27□□□□□ -1.89
LHX1P48742 RN7SKP272-201ENST00000516988 232 ntBASIC3.27□□□□□ -1.89
LHX1P48742 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.27□□□□□ -1.89
LHX1P48742 ERHP1-201ENST00000523006 310 ntBASIC3.27□□□□□ -1.89
LHX1P48742 MTND4LP18-201ENST00000526864 291 ntBASIC3.27□□□□□ -1.89
LHX1P48742 DEFB108D-201ENST00000527787 222 ntBASIC3.27□□□□□ -1.89
LHX1P48742 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.27□□□□□ -1.89
LHX1P48742 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.27□□□□□ -1.89
LHX1P48742 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.27□□□□□ -1.89
LHX1P48742 ROCK1P1-201ENST00000573767 549 ntBASIC3.27□□□□□ -1.89
LHX1P48742 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.27□□□□□ -1.89
LHX1P48742 Z99497.2-201ENST00000603634 310 ntBASIC3.27□□□□□ -1.89
LHX1P48742 AC121247.2-201ENST00000604776 136 ntBASIC3.27□□□□□ -1.89
LHX1P48742 AL160281.1-201ENST00000605307 311 ntBASIC3.27□□□□□ -1.89
LHX1P48742 U1.23-201ENST00000610293 146 ntBASIC3.27□□□□□ -1.89
LHX1P48742 AC099778.2-201ENST00000610904 211 ntBASIC3.27□□□□□ -1.89
LHX1P48742 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.27□□□□□ -1.89
LHX1P48742 AL110115.1-201ENST00000614396 364 ntBASIC3.27□□□□□ -1.89
LHX1P48742 RNU1-68P-201ENST00000615382 146 ntBASIC3.27□□□□□ -1.89
LHX1P48742 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.27□□□□□ -1.89
LHX1P48742 U1.39-201ENST00000621562 146 ntBASIC3.27□□□□□ -1.89
LHX1P48742 AC112204.3-201ENST00000623822 332 ntBASIC3.27□□□□□ -1.89
LHX1P48742 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.27□□□□□ -1.89
LHX1P48742 AC019226.1-201ENST00000625666 515 ntBASIC3.27□□□□□ -1.89
LHX1P48742 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.27□□□□□ -1.89
LHX1P48742 MIR4275-201ENST00000636486 87 ntBASIC3.27□□□□□ -1.89
LHX1P48742 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.27□□□□□ -1.89
LHX1P48742 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.27□□□□□ -1.89
LHX1P48742 DDX10P1-201ENST00000448545 1933 ntBASIC3.27□□□□□ -1.89
LHX1P48742 AC138915.3-201ENST00000562908 1389 ntBASIC3.26□□□□□ -1.89
LHX1P48742 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.26□□□□□ -1.89
LHX1P48742 AC093010.3-201ENST00000570269 15214 ntBASIC3.26□□□□□ -1.89
LHX1P48742 AL353746.1-201ENST00000566293 6881 ntBASIC3.26□□□□□ -1.89
LHX1P48742 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.26□□□□□ -1.89
LHX1P48742 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
LHX1P48742 SNORA54-201ENST00000384281 123 ntBASIC3.26□□□□□ -1.89
LHX1P48742 RNU6-809P-201ENST00000384461 107 ntBASIC3.26□□□□□ -1.89
LHX1P48742 SNORD67-201ENST00000390833 111 ntBASIC3.26□□□□□ -1.89
LHX1P48742 RNU6-754P-201ENST00000391166 107 ntBASIC3.26□□□□□ -1.89
LHX1P48742 AC096664.2-201ENST00000411843 406 ntBASIC3.26□□□□□ -1.89
LHX1P48742 RPL21P32-201ENST00000419877 477 ntBASIC3.26□□□□□ -1.89
LHX1P48742 RPS15AP6-201ENST00000420703 385 ntBASIC3.26□□□□□ -1.89
LHX1P48742 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.26□□□□□ -1.89
LHX1P48742 BMI1P1-201ENST00000445879 941 ntBASIC3.26□□□□□ -1.89
LHX1P48742 EPS15P1-201ENST00000448836 336 ntBASIC3.26□□□□□ -1.89
LHX1P48742 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.26□□□□□ -1.89
LHX1P48742 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
LHX1P48742 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.26□□□□□ -1.89
LHX1P48742 AC109464.2-201ENST00000510242 943 ntBASIC3.26□□□□□ -1.89
LHX1P48742 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.26□□□□□ -1.89
LHX1P48742 AF131216.2-201ENST00000512316 564 ntBASIC3.26□□□□□ -1.89
LHX1P48742 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.26□□□□□ -1.89
LHX1P48742 SNORA31.22-201ENST00000517204 135 ntBASIC3.26□□□□□ -1.89
LHX1P48742 AC025881.1-201ENST00000518851 512 ntBASIC3.26□□□□□ -1.89
LHX1P48742 AP001804.3-201ENST00000525146 880 ntBASIC3.26□□□□□ -1.89
LHX1P48742 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.26□□□□□ -1.89
LHX1P48742 AP000907.2-201ENST00000530827 353 ntBASIC3.26□□□□□ -1.89
LHX1P48742 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.26□□□□□ -1.89
LHX1P48742 OR4T1P-201ENST00000554933 911 ntBASIC3.26□□□□□ -1.89
LHX1P48742 AC055876.1-202ENST00000567053 138 ntBASIC3.26□□□□□ -1.89
LHX1P48742 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.26□□□□□ -1.89
LHX1P48742 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.26□□□□□ -1.89
LHX1P48742 AC105224.1-201ENST00000587055 421 ntBASIC3.26□□□□□ -1.89
LHX1P48742 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.26□□□□□ -1.89
LHX1P48742 AF131215.7-201ENST00000602443 707 ntBASIC3.26□□□□□ -1.89
LHX1P48742 AC068790.3-201ENST00000602988 553 ntBASIC3.26□□□□□ -1.89
LHX1P48742 AL022161.1-201ENST00000604390 213 ntBASIC3.26□□□□□ -1.89
LHX1P48742 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms