Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NEDD4P46934 RNU2-52P-201ENST00000410680 190 ntBASIC3.2□□□□□ -1.9
NEDD4P46934 BMS1P22-201ENST00000414726 313 ntBASIC3.2□□□□□ -1.9
NEDD4P46934 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.2□□□□□ -1.9
NEDD4P46934 RPL21P112-201ENST00000434403 463 ntBASIC3.2□□□□□ -1.9
NEDD4P46934 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.2□□□□□ -1.9
NEDD4P46934 AC103975.1-201ENST00000482506 483 ntBASIC3.2□□□□□ -1.9
NEDD4P46934 RPL31P13-201ENST00000484151 370 ntBASIC3.2□□□□□ -1.9
NEDD4P46934 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.2□□□□□ -1.9
NEDD4P46934 AC118465.1-201ENST00000513820 1271 ntBASIC3.2□□□□□ -1.9
NEDD4P46934 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.2□□□□□ -1.9
NEDD4P46934 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.2□□□□□ -1.9
NEDD4P46934 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.2□□□□□ -1.9
NEDD4P46934 MTCO1P47-201ENST00000523889 1271 ntBASIC3.2□□□□□ -1.9
NEDD4P46934 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.2□□□□□ -1.9
NEDD4P46934 AC018630.1-201ENST00000541376 925 ntBASIC3.2□□□□□ -1.9
NEDD4P46934 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.2□□□□□ -1.9
NEDD4P46934 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.2□□□□□ -1.9
NEDD4P46934 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.2□□□□□ -1.9
NEDD4P46934 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.2□□□□□ -1.9
NEDD4P46934 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
NEDD4P46934 MIR3605-201ENST00000583214 100 ntBASIC3.2□□□□□ -1.9
NEDD4P46934 MIR4506-201ENST00000584693 77 ntBASIC3.2□□□□□ -1.9
NEDD4P46934 AC004853.1-201ENST00000604902 698 ntBASIC3.2□□□□□ -1.9
NEDD4P46934 AP001148.1-201ENST00000624124 2359 ntBASIC3.2□□□□□ -1.9
NEDD4P46934 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
NEDD4P46934 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NEDD4P46934 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.2□□□□□ -1.9
NEDD4P46934 FAM35BP-202ENST00000497389 3337 ntBASIC3.2□□□□□ -1.9
NEDD4P46934 AC062016.1-201ENST00000355719 319 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 RNU6-553P-201ENST00000364047 96 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 RNU6-289P-201ENST00000364093 107 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 RNA5SP189-201ENST00000364920 115 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 RNU6-359P-201ENST00000365466 108 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 DYNLT3P1-201ENST00000378574 347 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 AL138880.1-201ENST00000405824 642 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 RNU6-712P-201ENST00000410558 100 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 RNA5SP344-201ENST00000411081 104 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 AC092447.6-201ENST00000414578 210 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.19□□□□□ -1.9
NEDD4P46934 RAD23BP2-201ENST00000416003 1207 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.19□□□□□ -1.9
NEDD4P46934 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.19□□□□□ -1.9
NEDD4P46934 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.19□□□□□ -1.9
NEDD4P46934 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.19□□□□□ -1.9
NEDD4P46934 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.19□□□□□ -1.9
NEDD4P46934 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NEDD4P46934 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.19□□□□□ -1.9
NEDD4P46934 MRPL50P4-201ENST00000446432 475 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 AC108860.1-201ENST00000484521 383 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 AC106872.3-201ENST00000495104 446 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.19□□□□□ -1.9
NEDD4P46934 AC022447.3-201ENST00000506865 495 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 AC005178.1-201ENST00000508392 440 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 RNU6-1095P-201ENST00000516148 108 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.19□□□□□ -1.9
NEDD4P46934 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.19□□□□□ -1.9
NEDD4P46934 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.19□□□□□ -1.9
NEDD4P46934 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.19□□□□□ -1.9
NEDD4P46934 AC109446.2-201ENST00000567872 497 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 AC135628.1-201ENST00000568867 534 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 AC008088.1-201ENST00000580993 280 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 SNORD84-203ENST00000584275 78 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 ELOCP29-201ENST00000588193 334 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.19□□□□□ -1.9
NEDD4P46934 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
NEDD4P46934 AC068057.2-201ENST00000624047 895 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.19□□□□□ -1.9
NEDD4P46934 AC006927.3-201ENST00000638789 384 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 AC092447.10-201ENST00000620607 1652 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.19□□□□□ -1.9
NEDD4P46934 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NEDD4P46934 AC116096.1-201ENST00000566804 2314 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 AL672167.1-206ENST00000356293 943 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 SNORA31-201ENST00000362607 130 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 RNU6-343P-201ENST00000364709 104 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 RNU6-1181P-201ENST00000384191 106 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 HMGB1P11-201ENST00000413899 637 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.19□□□□□ -1.9
NEDD4P46934 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.19□□□□□ -1.9
NEDD4P46934 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.19□□□□□ -1.9
NEDD4P46934 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.19□□□□□ -1.9
NEDD4P46934 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.19□□□□□ -1.9
NEDD4P46934 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.19□□□□□ -1.9
NEDD4P46934 MTCYBP45-201ENST00000435243 565 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 GSTA11P-201ENST00000452866 669 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 SNORD109B-201ENST00000458961 67 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 SNORD109A-201ENST00000459128 67 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 BET1P1-201ENST00000482276 359 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.19□□□□□ -1.9
NEDD4P46934 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.19□□□□□ -1.9
NEDD4P46934 SNORA9.3-201ENST00000516383 129 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 IGHV3-76-201ENST00000522465 295 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NEDD4P46934 MTCYBP41-201ENST00000528913 1123 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 AP004242.1-201ENST00000533701 349 ntBASIC3.19□□□□□ -1.9
NEDD4P46934 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms