Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SSR1P43307 MIR491-201ENST00000384877 84 ntBASIC2.79□□□□□ -1.96
SSR1P43307 SNORA48.2-201ENST00000390926 124 ntBASIC2.79□□□□□ -1.96
SSR1P43307 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.79□□□□□ -1.96
SSR1P43307 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.79□□□□□ -1.96
SSR1P43307 GTF2IP3-201ENST00000433887 494 ntBASIC2.79□□□□□ -1.96
SSR1P43307 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.79□□□□□ -1.96
SSR1P43307 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.79□□□□□ -1.96
SSR1P43307 BX322784.1-201ENST00000455793 1077 ntBASIC2.79□□□□□ -1.96
SSR1P43307 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.79□□□□□ -1.96
SSR1P43307 AC108734.3-201ENST00000481241 1165 ntBASIC2.79□□□□□ -1.96
SSR1P43307 AC104629.1-201ENST00000494226 508 ntBASIC2.79□□□□□ -1.96
SSR1P43307 AC080014.1-201ENST00000496877 1201 ntBASIC2.79□□□□□ -1.96
SSR1P43307 KLRA1P-201ENST00000503499 986 ntBASIC2.79□□□□□ -1.96
SSR1P43307 MTCYBP16-201ENST00000509187 1129 ntBASIC2.79□□□□□ -1.96
SSR1P43307 XKRY-201ENST00000510392 1100 ntBASIC2.79□□□□□ -1.96
SSR1P43307 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.79□□□□□ -1.96
SSR1P43307 SNORA31.18-201ENST00000517043 134 ntBASIC2.79□□□□□ -1.96
SSR1P43307 SNORA31.22-201ENST00000517204 135 ntBASIC2.79□□□□□ -1.96
SSR1P43307 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.79□□□□□ -1.96
SSR1P43307 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.79□□□□□ -1.96
SSR1P43307 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.79□□□□□ -1.96
SSR1P43307 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.79□□□□□ -1.96
SSR1P43307 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.79□□□□□ -1.96
SSR1P43307 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.79□□□□□ -1.96
SSR1P43307 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.79□□□□□ -1.96
SSR1P43307 AC011260.1-201ENST00000578420 472 ntBASIC2.79□□□□□ -1.96
SSR1P43307 BNIP3P27-201ENST00000599991 412 ntBASIC2.79□□□□□ -1.96
SSR1P43307 AL022067.1-201ENST00000602426 454 ntBASIC2.79□□□□□ -1.96
SSR1P43307 AC024257.5-201ENST00000612739 531 ntBASIC2.79□□□□□ -1.96
SSR1P43307 AP003476.1-201ENST00000623984 516 ntBASIC2.79□□□□□ -1.96
SSR1P43307 AC022336.2-201ENST00000568966 2538 ntBASIC2.79□□□□□ -1.96
SSR1P43307 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SSR1P43307 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.79□□□□□ -1.96
SSR1P43307 SNORA68.1-201ENST00000364537 132 ntBASIC2.78□□□□□ -1.96
SSR1P43307 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SSR1P43307 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.78□□□□□ -1.96
SSR1P43307 AL031679.1-201ENST00000400616 525 ntBASIC2.78□□□□□ -1.96
SSR1P43307 AL513175.2-201ENST00000422071 443 ntBASIC2.78□□□□□ -1.96
SSR1P43307 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.78□□□□□ -1.96
SSR1P43307 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.78□□□□□ -1.96
SSR1P43307 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.78□□□□□ -1.96
SSR1P43307 AC104982.1-201ENST00000478775 574 ntBASIC2.78□□□□□ -1.96
SSR1P43307 AC011825.1-201ENST00000484967 388 ntBASIC2.78□□□□□ -1.96
SSR1P43307 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.78□□□□□ -1.96
SSR1P43307 NDUFB4P2-201ENST00000509515 391 ntBASIC2.78□□□□□ -1.96
SSR1P43307 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.78□□□□□ -1.96
SSR1P43307 AP000889.2-201ENST00000532684 490 ntBASIC2.78□□□□□ -1.96
SSR1P43307 HIGD1AP17-201ENST00000554576 276 ntBASIC2.78□□□□□ -1.96
SSR1P43307 AL355836.1-201ENST00000555951 870 ntBASIC2.78□□□□□ -1.96
SSR1P43307 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.78□□□□□ -1.96
SSR1P43307 HSPE1P3-201ENST00000559254 309 ntBASIC2.78□□□□□ -1.96
SSR1P43307 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.78□□□□□ -1.96
SSR1P43307 AP001429.1-201ENST00000602568 530 ntBASIC2.78□□□□□ -1.96
SSR1P43307 AL606834.3-201ENST00000602615 496 ntBASIC2.78□□□□□ -1.96
SSR1P43307 AC024060.1-201ENST00000607052 494 ntBASIC2.78□□□□□ -1.96
SSR1P43307 AC023158.2-201ENST00000614876 543 ntBASIC2.78□□□□□ -1.96
SSR1P43307 AC090132.2-201ENST00000615881 347 ntBASIC2.78□□□□□ -1.96
SSR1P43307 AC109454.4-201ENST00000623411 649 ntBASIC2.78□□□□□ -1.96
SSR1P43307 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.78□□□□□ -1.96
SSR1P43307 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.78□□□□□ -1.96
SSR1P43307 AL137003.2-201ENST00000606924 2538 ntBASIC2.78□□□□□ -1.96
SSR1P43307 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
SSR1P43307 CDR1-202ENST00000625883 1485 ntBASIC2.77□□□□□ -1.97
SSR1P43307 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.77□□□□□ -1.97
SSR1P43307 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SSR1P43307 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.77□□□□□ -1.97
SSR1P43307 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SSR1P43307 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.77□□□□□ -1.97
SSR1P43307 SNORA38-201ENST00000363946 132 ntBASIC2.77□□□□□ -1.97
SSR1P43307 SNORA70.4-201ENST00000365509 134 ntBASIC2.77□□□□□ -1.97
SSR1P43307 RNU6-952P-201ENST00000391164 108 ntBASIC2.77□□□□□ -1.97
SSR1P43307 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SSR1P43307 RNA5SP21-201ENST00000410917 96 ntBASIC2.77□□□□□ -1.97
SSR1P43307 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.77□□□□□ -1.97
SSR1P43307 USP9YP27-201ENST00000418455 438 ntBASIC2.77□□□□□ -1.97
SSR1P43307 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.77□□□□□ -1.97
SSR1P43307 AC006946.1-201ENST00000429106 328 ntBASIC2.77□□□□□ -1.97
SSR1P43307 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.77□□□□□ -1.97
SSR1P43307 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.77□□□□□ -1.97
SSR1P43307 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.77□□□□□ -1.97
SSR1P43307 USP9YP22-201ENST00000438971 294 ntBASIC2.77□□□□□ -1.97
SSR1P43307 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.77□□□□□ -1.97
SSR1P43307 IPO7P1-201ENST00000442031 636 ntBASIC2.77□□□□□ -1.97
SSR1P43307 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.77□□□□□ -1.97
SSR1P43307 MTCO3P11-201ENST00000455103 774 ntBASIC2.77□□□□□ -1.97
SSR1P43307 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.77□□□□□ -1.97
SSR1P43307 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.77□□□□□ -1.97
SSR1P43307 RNU6-276P-201ENST00000516114 96 ntBASIC2.77□□□□□ -1.97
SSR1P43307 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.77□□□□□ -1.97
SSR1P43307 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
SSR1P43307 AC079600.2-201ENST00000550076 130 ntBASIC2.77□□□□□ -1.97
SSR1P43307 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.77□□□□□ -1.97
SSR1P43307 AL132657.2-201ENST00000564417 358 ntBASIC2.77□□□□□ -1.97
SSR1P43307 AC068135.2-201ENST00000569293 1028 ntBASIC2.77□□□□□ -1.97
SSR1P43307 AL160237.3-201ENST00000604114 1013 ntBASIC2.77□□□□□ -1.97
SSR1P43307 AC013553.2-201ENST00000604244 589 ntBASIC2.77□□□□□ -1.97
SSR1P43307 AC069304.2-201ENST00000605154 435 ntBASIC2.77□□□□□ -1.97
SSR1P43307 AC069545.1-201ENST00000605671 358 ntBASIC2.77□□□□□ -1.97
SSR1P43307 AC004067.1-201ENST00000608733 700 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms