Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBEC1P41238 SDAD1P2-201ENST00000441308 2028 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBEC1P41238 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
APOBEC1P41238 GABPAP-201ENST00000419271 1356 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 Y_RNA.41-201ENST00000362646 102 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 SNORD56.2-201ENST00000363242 71 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 RN7SKP226-201ENST00000364912 300 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 AL391417.1-201ENST00000404100 426 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 RNU6ATAC-201ENST00000408749 126 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 AL031779.1-201ENST00000415663 330 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.28□□□□□ -1.88
APOBEC1P41238 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.28□□□□□ -1.88
APOBEC1P41238 C1DP4-201ENST00000455429 424 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 SNORD105B-201ENST00000458770 79 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 SNORD97-201ENST00000459187 142 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 AC010631.1-201ENST00000474150 156 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.28□□□□□ -1.88
APOBEC1P41238 AC004924.1-201ENST00000480160 781 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
APOBEC1P41238 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
APOBEC1P41238 AC108078.1-201ENST00000508073 725 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.28□□□□□ -1.88
APOBEC1P41238 AL359273.1-201ENST00000510918 627 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.28□□□□□ -1.88
APOBEC1P41238 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
APOBEC1P41238 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.28□□□□□ -1.88
APOBEC1P41238 AL020997.2-201ENST00000602607 184 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 AC013476.2-201ENST00000614456 459 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 SDR42E1P2-201ENST00000614861 481 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 AC244100.1-202ENST00000621554 382 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 AP003355.3-201ENST00000623465 114 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 LRRC77P-213ENST00000637727 880 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 OTUD4P1-201ENST00000237841 3067 ntBASIC3.28□□□□□ -1.88
APOBEC1P41238 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
APOBEC1P41238 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
APOBEC1P41238 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBEC1P41238 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBEC1P41238 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
APOBEC1P41238 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBEC1P41238 OR5J1P-201ENST00000313544 939 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBEC1P41238 HSPE1P11-201ENST00000339579 310 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 RNU6-511P-201ENST00000363496 107 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 RNU6-169P-201ENST00000365336 107 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
APOBEC1P41238 SNORA36C-201ENST00000384289 132 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
APOBEC1P41238 MIR1290-201ENST00000408735 78 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 RNU2-37P-201ENST00000410695 177 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 ATP5A1P2-201ENST00000412323 255 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 AF274854.1-201ENST00000413236 615 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
APOBEC1P41238 AL035423.1-201ENST00000420331 213 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 AC018630.2-202ENST00000422992 927 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 RPL27AP8-201ENST00000424277 446 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.27□□□□□ -1.89
APOBEC1P41238 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.27□□□□□ -1.89
APOBEC1P41238 CYCSP43-201ENST00000438233 310 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 DNAJC19P4-201ENST00000440115 345 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.27□□□□□ -1.89
APOBEC1P41238 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.27□□□□□ -1.89
APOBEC1P41238 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.27□□□□□ -1.89
APOBEC1P41238 AC140076.1-201ENST00000449897 361 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.27□□□□□ -1.89
APOBEC1P41238 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.27□□□□□ -1.89
APOBEC1P41238 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.27□□□□□ -1.89
APOBEC1P41238 AC023194.1-201ENST00000493084 308 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 RNU2-27P-201ENST00000516185 142 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 RNU7-51P-201ENST00000516560 62 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 RN7SKP289-201ENST00000517244 295 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 AC007991.1-201ENST00000522680 631 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.27□□□□□ -1.89
APOBEC1P41238 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
APOBEC1P41238 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.27□□□□□ -1.89
APOBEC1P41238 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.27□□□□□ -1.89
APOBEC1P41238 RPL21P12-201ENST00000559810 515 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.27□□□□□ -1.89
APOBEC1P41238 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.27□□□□□ -1.89
APOBEC1P41238 BDH2P1-201ENST00000602288 736 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 AL592295.2-201ENST00000612578 206 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 MIR6798-201ENST00000612887 67 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 AC010133.1-201ENST00000615809 842 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 AC110801.1-201ENST00000623590 212 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.27□□□□□ -1.89
APOBEC1P41238 AC048347.1-201ENST00000624621 427 ntBASIC3.27□□□□□ -1.89
APOBEC1P41238 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
APOBEC1P41238 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.27□□□□□ -1.89
APOBEC1P41238 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
APOBEC1P41238 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBEC1P41238 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
APOBEC1P41238 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
APOBEC1P41238 TNPO1P3-201ENST00000436471 2662 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
APOBEC1P41238 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.26□□□□□ -1.89
APOBEC1P41238 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
APOBEC1P41238 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.26□□□□□ -1.89
APOBEC1P41238 EXOC5P1-201ENST00000510543 1969 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
APOBEC1P41238 RNU6-181P-201ENST00000363225 107 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms