Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RPL23AP82-202ENST00000427528 469 ntBASIC4.19□□□□□ -1.74
COL15A1P39059 UBE2V1P13-201ENST00000436983 439 ntBASIC4.19□□□□□ -1.74
COL15A1P39059 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.19□□□□□ -1.74
COL15A1P39059 AC025750.2-201ENST00000442609 450 ntBASIC4.19□□□□□ -1.74
COL15A1P39059 RPL29P29-201ENST00000448725 423 ntBASIC4.19□□□□□ -1.74
COL15A1P39059 GAPDHP17-201ENST00000449858 1001 ntBASIC4.19□□□□□ -1.74
COL15A1P39059 MRPS31P2-201ENST00000451581 518 ntBASIC4.19□□□□□ -1.74
COL15A1P39059 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.19□□□□□ -1.74
COL15A1P39059 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.19□□□□□ -1.74
COL15A1P39059 CENPBD1P1-201ENST00000464061 469 ntBASIC4.19□□□□□ -1.74
COL15A1P39059 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.19□□□□□ -1.74
COL15A1P39059 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
COL15A1P39059 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.19□□□□□ -1.74
COL15A1P39059 DEFB108A-201ENST00000530110 222 ntBASIC4.19□□□□□ -1.74
COL15A1P39059 AP003385.6-201ENST00000531603 374 ntBASIC4.19□□□□□ -1.74
COL15A1P39059 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.19□□□□□ -1.74
COL15A1P39059 AC136619.2-201ENST00000563361 631 ntBASIC4.19□□□□□ -1.74
COL15A1P39059 AC004853.1-201ENST00000604902 698 ntBASIC4.19□□□□□ -1.74
COL15A1P39059 RNU6-87P-201ENST00000607561 108 ntBASIC4.19□□□□□ -1.74
COL15A1P39059 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.19□□□□□ -1.74
COL15A1P39059 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
COL15A1P39059 SNORD39.4-201ENST00000620099 78 ntBASIC4.19□□□□□ -1.74
COL15A1P39059 AC138649.3-201ENST00000622154 254 ntBASIC4.19□□□□□ -1.74
COL15A1P39059 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.19□□□□□ -1.74
COL15A1P39059 AL160394.1-201ENST00000624765 724 ntBASIC4.19□□□□□ -1.74
COL15A1P39059 AC091925.2-201ENST00000625059 256 ntBASIC4.19□□□□□ -1.74
COL15A1P39059 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL15A1P39059 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL15A1P39059 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.19□□□□□ -1.74
COL15A1P39059 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
COL15A1P39059 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
COL15A1P39059 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL15A1P39059 RNA5SP167-201ENST00000365461 116 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL15A1P39059 RPL7P25-201ENST00000404151 721 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 AL138885.1-201ENST00000405921 675 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 ISCA1P6-201ENST00000427740 390 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 AC108734.1-201ENST00000439549 399 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 AC008264.1-201ENST00000447612 367 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.18□□□□□ -1.74
COL15A1P39059 SNRPGP5-201ENST00000456003 220 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 AC093899.1-201ENST00000457984 376 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 ST13P14-201ENST00000474095 734 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 AC021382.1-201ENST00000483523 359 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.18□□□□□ -1.74
COL15A1P39059 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.18□□□□□ -1.74
COL15A1P39059 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.18□□□□□ -1.74
COL15A1P39059 MIR2114-201ENST00000516645 80 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 RNU6-430P-201ENST00000517078 107 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
COL15A1P39059 AC022616.6-201ENST00000520479 119 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.18□□□□□ -1.74
COL15A1P39059 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.18□□□□□ -1.74
COL15A1P39059 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
COL15A1P39059 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.18□□□□□ -1.74
COL15A1P39059 SETP2-201ENST00000553886 926 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.18□□□□□ -1.74
COL15A1P39059 AC006504.3-201ENST00000586818 523 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 HMGN1P30-201ENST00000589286 268 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.18□□□□□ -1.74
COL15A1P39059 AC121334.2-201ENST00000605387 271 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.18□□□□□ -1.74
COL15A1P39059 AC093732.2-201ENST00000607950 274 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 AC095031.1-201ENST00000623685 672 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 AC079597.1-201ENST00000624306 508 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 PISRT1-201ENST00000626175 531 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.18□□□□□ -1.74
COL15A1P39059 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.18□□□□□ -1.74
COL15A1P39059 AC099654.13-201ENST00000639774 207 ntBASIC4.18□□□□□ -1.74
COL15A1P39059 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
COL15A1P39059 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL15A1P39059 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
COL15A1P39059 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL15A1P39059 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL15A1P39059 Y_RNA.296-201ENST00000364930 108 ntBASIC4.17□□□□□ -1.74
COL15A1P39059 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
COL15A1P39059 RPL5P18-201ENST00000406671 891 ntBASIC4.17□□□□□ -1.74
COL15A1P39059 AC127526.1-201ENST00000417526 366 ntBASIC4.17□□□□□ -1.74
COL15A1P39059 BX295541.1-201ENST00000417774 250 ntBASIC4.17□□□□□ -1.74
COL15A1P39059 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.17□□□□□ -1.74
COL15A1P39059 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.17□□□□□ -1.74
COL15A1P39059 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.17□□□□□ -1.74
COL15A1P39059 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.17□□□□□ -1.74
COL15A1P39059 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.17□□□□□ -1.74
COL15A1P39059 AC112653.1-201ENST00000443851 386 ntBASIC4.17□□□□□ -1.74
COL15A1P39059 AL590399.6-201ENST00000446396 307 ntBASIC4.17□□□□□ -1.74
COL15A1P39059 AC105252.1-201ENST00000503089 286 ntBASIC4.17□□□□□ -1.74
COL15A1P39059 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.17□□□□□ -1.74
COL15A1P39059 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.17□□□□□ -1.74
COL15A1P39059 Y_RNA.672-201ENST00000516289 104 ntBASIC4.17□□□□□ -1.74
COL15A1P39059 RNU6-506P-201ENST00000516553 94 ntBASIC4.17□□□□□ -1.74
COL15A1P39059 RNU6-201P-201ENST00000517100 61 ntBASIC4.17□□□□□ -1.74
COL15A1P39059 AP000907.2-201ENST00000530827 353 ntBASIC4.17□□□□□ -1.74
COL15A1P39059 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.17□□□□□ -1.74
COL15A1P39059 AC104984.5-201ENST00000586878 94 ntBASIC4.17□□□□□ -1.74
COL15A1P39059 AL161729.4-201ENST00000604650 476 ntBASIC4.17□□□□□ -1.74
COL15A1P39059 AL022154.1-201ENST00000604698 785 ntBASIC4.17□□□□□ -1.74
COL15A1P39059 AL590099.1-201ENST00000615276 138 ntBASIC4.17□□□□□ -1.74
COL15A1P39059 AC006065.5-201ENST00000623427 349 ntBASIC4.17□□□□□ -1.74
COL15A1P39059 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms