Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 RPS26P30-201ENST00000443431 335 ntBASIC1.35□□□□□ -2.19
SNCAP37840 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.35□□□□□ -2.19
SNCAP37840 AC005297.2-201ENST00000450430 606 ntBASIC1.35□□□□□ -2.19
SNCAP37840 DNAJC19P8-201ENST00000452887 259 ntBASIC1.35□□□□□ -2.19
SNCAP37840 AC072039.1-201ENST00000477611 581 ntBASIC1.35□□□□□ -2.19
SNCAP37840 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.35□□□□□ -2.19
SNCAP37840 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.35□□□□□ -2.19
SNCAP37840 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.35□□□□□ -2.19
SNCAP37840 AL354943.1-201ENST00000572103 781 ntBASIC1.35□□□□□ -2.19
SNCAP37840 AC025165.5-201ENST00000602802 578 ntBASIC1.35□□□□□ -2.19
SNCAP37840 AC068944.2-201ENST00000610373 403 ntBASIC1.35□□□□□ -2.19
SNCAP37840 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SNCAP37840 HSPA8P4-201ENST00000511877 1920 ntBASIC1.34□□□□□ -2.19
SNCAP37840 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SNCAP37840 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
SNCAP37840 Z98749.2-208ENST00000381646 500 ntBASIC1.34□□□□□ -2.19
SNCAP37840 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SNCAP37840 MCTS2P-201ENST00000394552 546 ntBASIC1.34□□□□□ -2.19
SNCAP37840 RNU6-955P-201ENST00000410497 104 ntBASIC1.34□□□□□ -2.19
SNCAP37840 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.34□□□□□ -2.19
SNCAP37840 FCF1P2-201ENST00000415284 583 ntBASIC1.34□□□□□ -2.19
SNCAP37840 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.34□□□□□ -2.19
SNCAP37840 EZH2P1-201ENST00000431167 291 ntBASIC1.34□□□□□ -2.19
SNCAP37840 Z80107.1-201ENST00000436830 412 ntBASIC1.34□□□□□ -2.19
SNCAP37840 RPL7P54-201ENST00000438336 674 ntBASIC1.34□□□□□ -2.19
SNCAP37840 AL714022.1-201ENST00000439897 151 ntBASIC1.34□□□□□ -2.19
SNCAP37840 OR10R1P-201ENST00000441524 1141 ntBASIC1.34□□□□□ -2.19
SNCAP37840 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.34□□□□□ -2.19
SNCAP37840 AL500527.1-201ENST00000448532 255 ntBASIC1.34□□□□□ -2.19
SNCAP37840 PNPLA4P1-201ENST00000458328 305 ntBASIC1.34□□□□□ -2.19
SNCAP37840 AC116337.2-201ENST00000477662 156 ntBASIC1.34□□□□□ -2.19
SNCAP37840 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.34□□□□□ -2.19
SNCAP37840 AC104564.1-201ENST00000493028 407 ntBASIC1.34□□□□□ -2.19
SNCAP37840 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.34□□□□□ -2.19
SNCAP37840 RNF138P1-201ENST00000502765 546 ntBASIC1.34□□□□□ -2.19
SNCAP37840 AP001960.1-201ENST00000506494 658 ntBASIC1.34□□□□□ -2.19
SNCAP37840 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.34□□□□□ -2.19
SNCAP37840 AC021146.7-201ENST00000509604 775 ntBASIC1.34□□□□□ -2.19
SNCAP37840 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.34□□□□□ -2.19
SNCAP37840 AC093770.1-201ENST00000511559 571 ntBASIC1.34□□□□□ -2.19
SNCAP37840 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.34□□□□□ -2.19
SNCAP37840 RN7SKP96-201ENST00000516948 297 ntBASIC1.34□□□□□ -2.19
SNCAP37840 COX6B1P6-201ENST00000522347 255 ntBASIC1.34□□□□□ -2.19
SNCAP37840 EEF1A1P37-201ENST00000522748 715 ntBASIC1.34□□□□□ -2.19
SNCAP37840 RANP3-201ENST00000530970 276 ntBASIC1.34□□□□□ -2.19
SNCAP37840 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.34□□□□□ -2.19
SNCAP37840 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.34□□□□□ -2.19
SNCAP37840 HSBP1P1-201ENST00000555205 166 ntBASIC1.34□□□□□ -2.19
SNCAP37840 AC124283.4-201ENST00000581815 456 ntBASIC1.34□□□□□ -2.19
SNCAP37840 AC103710.2-201ENST00000609912 942 ntBASIC1.34□□□□□ -2.19
SNCAP37840 MKKS-204ENST00000639674 192 ntBASIC1.34□□□□□ -2.19
SNCAP37840 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.34□□□□□ -2.2
SNCAP37840 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.34□□□□□ -2.2
SNCAP37840 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SNCAP37840 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SNCAP37840 AP000648.3-201ENST00000623539 4507 ntBASIC1.33□□□□□ -2.2
SNCAP37840 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
SNCAP37840 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.33□□□□□ -2.2
SNCAP37840 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.33□□□□□ -2.2
SNCAP37840 RNU6-339P-201ENST00000384310 107 ntBASIC1.33□□□□□ -2.2
SNCAP37840 MIR9-3-201ENST00000385084 90 ntBASIC1.33□□□□□ -2.2
SNCAP37840 AL512604.1-201ENST00000404812 257 ntBASIC1.33□□□□□ -2.2
SNCAP37840 MTATP6P31-201ENST00000406985 692 ntBASIC1.33□□□□□ -2.2
SNCAP37840 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.33□□□□□ -2.2
SNCAP37840 AC079780.1-201ENST00000428259 207 ntBASIC1.33□□□□□ -2.2
SNCAP37840 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.33□□□□□ -2.2
SNCAP37840 FGF7P5-201ENST00000441829 291 ntBASIC1.33□□□□□ -2.2
SNCAP37840 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.33□□□□□ -2.2
SNCAP37840 MTCO1P42-201ENST00000457379 726 ntBASIC1.33□□□□□ -2.2
SNCAP37840 AC023790.1-201ENST00000482174 347 ntBASIC1.33□□□□□ -2.2
SNCAP37840 RPS29P11-201ENST00000496507 171 ntBASIC1.33□□□□□ -2.2
SNCAP37840 AC092436.1-201ENST00000506450 503 ntBASIC1.33□□□□□ -2.2
SNCAP37840 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
SNCAP37840 CBX3P3-201ENST00000508108 532 ntBASIC1.33□□□□□ -2.2
SNCAP37840 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.33□□□□□ -2.2
SNCAP37840 RNU6-970P-201ENST00000516312 107 ntBASIC1.33□□□□□ -2.2
SNCAP37840 EIF4EP5-201ENST00000528228 640 ntBASIC1.33□□□□□ -2.2
SNCAP37840 MED28P6-201ENST00000558776 231 ntBASIC1.33□□□□□ -2.2
SNCAP37840 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.33□□□□□ -2.2
SNCAP37840 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.33□□□□□ -2.2
SNCAP37840 AC078899.2-201ENST00000595282 212 ntBASIC1.33□□□□□ -2.2
SNCAP37840 AC084768.2-201ENST00000622736 221 ntBASIC1.33□□□□□ -2.2
SNCAP37840 AC073592.7-201ENST00000623659 507 ntBASIC1.33□□□□□ -2.2
SNCAP37840 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.33□□□□□ -2.2
SNCAP37840 AC008555.8-201ENST00000623602 2168 ntBASIC1.32□□□□□ -2.2
SNCAP37840 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.32□□□□□ -2.2
SNCAP37840 AC099677.1-201ENST00000420575 175 ntBASIC1.32□□□□□ -2.2
SNCAP37840 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.32□□□□□ -2.2
SNCAP37840 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.32□□□□□ -2.2
SNCAP37840 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.32□□□□□ -2.2
SNCAP37840 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.32□□□□□ -2.2
SNCAP37840 HSPE1P21-201ENST00000438283 308 ntBASIC1.32□□□□□ -2.2
SNCAP37840 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
SNCAP37840 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.32□□□□□ -2.2
SNCAP37840 UBE2DNL-203ENST00000474922 222 ntBASIC1.32□□□□□ -2.2
SNCAP37840 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.32□□□□□ -2.2
SNCAP37840 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SNCAP37840 AC091965.2-201ENST00000512324 613 ntBASIC1.32□□□□□ -2.2
SNCAP37840 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.32□□□□□ -2.2
SNCAP37840 HMGB1P1-201ENST00000522557 636 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms