Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 YPEL5P3-201ENST00000547227 352 ntBASIC3.94□□□□□ -1.78
HOXD12P35452 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXD12P35452 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD12P35452 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD12P35452 BDH2P1-201ENST00000602288 736 ntBASIC3.94□□□□□ -1.78
HOXD12P35452 AC006254.3-201ENST00000603353 884 ntBASIC3.94□□□□□ -1.78
HOXD12P35452 AL110115.1-201ENST00000614396 364 ntBASIC3.94□□□□□ -1.78
HOXD12P35452 XIST_intron.1-201ENST00000619444 68 ntBASIC3.94□□□□□ -1.78
HOXD12P35452 AC091953.5-201ENST00000622919 233 ntBASIC3.94□□□□□ -1.78
HOXD12P35452 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.94□□□□□ -1.78
HOXD12P35452 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
HOXD12P35452 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HOXD12P35452 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXD12P35452 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HOXD12P35452 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD12P35452 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD12P35452 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
HOXD12P35452 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HOXD12P35452 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
HOXD12P35452 RNU5E-1-201ENST00000362477 120 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 Y_RNA.372-201ENST00000365599 102 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 RNU6-114P-201ENST00000384704 105 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 AL136372.1-201ENST00000403060 228 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 MTHFD2P2-201ENST00000407725 247 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 RN7SKP53-201ENST00000411337 315 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 MTND3P17-201ENST00000416968 344 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 AL139247.1-201ENST00000422768 325 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 ARF4P2-201ENST00000430209 526 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 AC119618.1-201ENST00000434191 222 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 TBCAP1-201ENST00000436520 327 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 HMGN2P20-201ENST00000437531 273 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 RPL23AP89-201ENST00000439324 255 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 MTND4P18-201ENST00000447010 465 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HOXD12P35452 SSXP4-201ENST00000451349 245 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXD12P35452 AC013267.1-201ENST00000458227 267 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 SNORD121B-201ENST00000458838 81 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 MTCO3P38-201ENST00000468910 766 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXD12P35452 AC007182.2-201ENST00000489251 402 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 ARL2BPP6-201ENST00000512757 439 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 SNORA74D-201ENST00000516404 141 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 RNU7-143P-201ENST00000516781 65 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.93□□□□□ -1.78
HOXD12P35452 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXD12P35452 AL845331.3-202ENST00000562856 261 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 AC092325.1-201ENST00000566449 554 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 AC012468.1-201ENST00000604888 430 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 AC012443.1-201ENST00000605605 231 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 MIR432-201ENST00000606207 94 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXD12P35452 AC007014.2-201ENST00000615581 479 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 AC112204.3-201ENST00000623822 332 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 AC091905.1-201ENST00000624400 311 ntBASIC3.93□□□□□ -1.78
HOXD12P35452 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
HOXD12P35452 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXD12P35452 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
HOXD12P35452 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXD12P35452 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXD12P35452 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXD12P35452 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD12P35452 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXD12P35452 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD12P35452 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD12P35452 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD12P35452 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD12P35452 OR5J1P-201ENST00000313544 939 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 RNY4P16-201ENST00000364768 94 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 RNU6-1283P-201ENST00000365314 105 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 MIR491-201ENST00000384877 84 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 MIR591-201ENST00000385290 95 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 CALM2P3-201ENST00000400429 449 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXD12P35452 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
HOXD12P35452 CCDC58P2-201ENST00000417131 366 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 YPEL5P1-201ENST00000419731 367 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXD12P35452 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXD12P35452 AC233728.2-201ENST00000425348 757 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 AL591419.1-201ENST00000427423 339 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 DPPA2P1-201ENST00000428060 556 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 AC133104.1-201ENST00000429100 218 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 AC002486.1-201ENST00000435098 391 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 MTATP6P30-201ENST00000443540 664 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXD12P35452 FGF7P6-202ENST00000451282 293 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXD12P35452 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXD12P35452 AL133162.1-201ENST00000463228 453 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXD12P35452 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HOXD12P35452 MTAPP1-201ENST00000489154 819 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 VN1R104P-201ENST00000505115 1009 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 AC017037.1-201ENST00000508460 471 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 AC009646.1-201ENST00000510455 318 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 AC010342.1-201ENST00000514047 877 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 RNA5SP164-201ENST00000516533 110 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 SNORA70.24-201ENST00000517233 118 ntBASIC3.92□□□□□ -1.78
HOXD12P35452 RNA5SP179-201ENST00000517284 121 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms