Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 EEF1E1P1-201ENST00000446998 430 ntBASIC2.64□□□□□ -1.99
SHMT2P34897 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.64□□□□□ -1.99
SHMT2P34897 AP000705.1-201ENST00000454567 350 ntBASIC2.64□□□□□ -1.99
SHMT2P34897 MEMO1P3-201ENST00000459811 302 ntBASIC2.64□□□□□ -1.99
SHMT2P34897 HMGB1P36-201ENST00000487709 576 ntBASIC2.64□□□□□ -1.99
SHMT2P34897 AC104090.1-201ENST00000506341 1171 ntBASIC2.64□□□□□ -1.99
SHMT2P34897 RN7SKP132-201ENST00000516001 208 ntBASIC2.64□□□□□ -1.99
SHMT2P34897 AC007954.1-201ENST00000554198 494 ntBASIC2.64□□□□□ -1.99
SHMT2P34897 AC105224.1-201ENST00000587055 421 ntBASIC2.64□□□□□ -1.99
SHMT2P34897 AF131215.7-201ENST00000602443 707 ntBASIC2.64□□□□□ -1.99
SHMT2P34897 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.64□□□□□ -1.99
SHMT2P34897 AP000254.1-201ENST00000609934 520 ntBASIC2.64□□□□□ -1.99
SHMT2P34897 AL450472.3-201ENST00000615578 367 ntBASIC2.64□□□□□ -1.99
SHMT2P34897 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.64□□□□□ -1.99
SHMT2P34897 AC013470.4-201ENST00000619978 986 ntBASIC2.64□□□□□ -1.99
SHMT2P34897 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.64□□□□□ -1.99
SHMT2P34897 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
SHMT2P34897 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.64□□□□□ -1.99
SHMT2P34897 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SHMT2P34897 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.64□□□□□ -1.99
SHMT2P34897 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.63□□□□□ -1.99
SHMT2P34897 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.63□□□□□ -1.99
SHMT2P34897 RNU6-859P-201ENST00000362728 107 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 SNORA25.6-201ENST00000364121 118 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 RNU6-777P-201ENST00000364265 104 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 RNU1-112P-201ENST00000364401 164 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 RNU6-359P-201ENST00000365466 108 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 RNU6-584P-201ENST00000410350 95 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 RNA5SP38-201ENST00000410750 119 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 HMGN2P35-201ENST00000412164 270 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.63□□□□□ -1.99
SHMT2P34897 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.63□□□□□ -1.99
SHMT2P34897 BX119904.4-201ENST00000424402 301 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 AC019097.1-201ENST00000424783 735 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 AC063976.3-201ENST00000426849 329 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.63□□□□□ -1.99
SHMT2P34897 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.63□□□□□ -1.99
SHMT2P34897 AC090774.1-201ENST00000435925 246 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 RPL23AP58-201ENST00000440453 469 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.63□□□□□ -1.99
SHMT2P34897 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.63□□□□□ -1.99
SHMT2P34897 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.63□□□□□ -1.99
SHMT2P34897 OR6K1P-201ENST00000456766 971 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 AC004924.1-201ENST00000480160 781 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 GTF2IP9-201ENST00000502460 301 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.63□□□□□ -1.99
SHMT2P34897 RNU1-103P-201ENST00000516502 125 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 SNORA31.22-201ENST00000517204 135 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 AP001804.3-201ENST00000525146 880 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.63□□□□□ -1.99
SHMT2P34897 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.63□□□□□ -1.99
SHMT2P34897 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.63□□□□□ -1.99
SHMT2P34897 AL355836.1-201ENST00000555951 870 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 AP001429.1-201ENST00000602568 530 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 AC019159.1-201ENST00000605094 187 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 OR2AS2P-201ENST00000606902 342 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SHMT2P34897 MIR6130-201ENST00000619419 109 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 AC022960.3-201ENST00000619794 441 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 AC011330.2-201ENST00000621680 635 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 AL078595.3-201ENST00000623815 1166 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.63□□□□□ -1.99
SHMT2P34897 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.63□□□□□ -1.99
SHMT2P34897 SCARNA15.3-201ENST00000626315 122 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.63□□□□□ -1.99
SHMT2P34897 SCARNA4.1-201ENST00000628597 123 ntBASIC2.63□□□□□ -1.99
SHMT2P34897 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SHMT2P34897 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.62□□□□□ -1.99
SHMT2P34897 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SHMT2P34897 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SHMT2P34897 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SHMT2P34897 RPS4XP3-201ENST00000398541 413 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 MIR1289-1-201ENST00000408836 144 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 RNA5SP184-201ENST00000411071 108 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 RPL19P1-201ENST00000411635 428 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 USP9YP33-201ENST00000412220 421 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.62□□□□□ -1.99
SHMT2P34897 USP9YP35-201ENST00000435696 412 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.62□□□□□ -1.99
SHMT2P34897 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.62□□□□□ -1.99
SHMT2P34897 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.62□□□□□ -1.99
SHMT2P34897 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.62□□□□□ -1.99
SHMT2P34897 SNORD121B-201ENST00000458838 81 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 RPL30P9-201ENST00000465586 330 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 AC008571.1-201ENST00000467232 300 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.62□□□□□ -1.99
SHMT2P34897 RPL7P18-201ENST00000478965 734 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 AC098799.2-201ENST00000509466 868 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 TPT1P8-201ENST00000510120 555 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 TBCAP3-201ENST00000512475 312 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 AC034159.1-201ENST00000513885 583 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.62□□□□□ -1.99
SHMT2P34897 RNU6-826P-201ENST00000516827 104 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
SHMT2P34897 AC103783.1-201ENST00000520506 373 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 AP003497.1-201ENST00000528472 562 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 AC004486.1-201ENST00000546846 233 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 AC125611.2-201ENST00000551907 647 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.62□□□□□ -1.99
SHMT2P34897 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms