Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 GMPSP1-201ENST00000514075 579 ntBASIC4.6□□□□□ -1.67
CNGA1P29973 Y_RNA.693-201ENST00000516641 110 ntBASIC4.6□□□□□ -1.67
CNGA1P29973 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.6□□□□□ -1.67
CNGA1P29973 IGKV2D-23-201ENST00000518179 286 ntBASIC4.6□□□□□ -1.67
CNGA1P29973 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.6□□□□□ -1.67
CNGA1P29973 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CNGA1P29973 AL512310.1-201ENST00000548639 172 ntBASIC4.6□□□□□ -1.67
CNGA1P29973 AC025627.2-201ENST00000576220 160 ntBASIC4.6□□□□□ -1.67
CNGA1P29973 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.6□□□□□ -1.67
CNGA1P29973 AL670379.6-201ENST00000603753 252 ntBASIC4.6□□□□□ -1.67
CNGA1P29973 AL670379.11-201ENST00000604059 253 ntBASIC4.6□□□□□ -1.67
CNGA1P29973 AC008162.1-201ENST00000604718 254 ntBASIC4.6□□□□□ -1.67
CNGA1P29973 AC007363.1-201ENST00000604736 620 ntBASIC4.6□□□□□ -1.67
CNGA1P29973 AL670379.1-201ENST00000604752 252 ntBASIC4.6□□□□□ -1.67
CNGA1P29973 AL670379.5-201ENST00000605253 252 ntBASIC4.6□□□□□ -1.67
CNGA1P29973 AL670379.12-201ENST00000605291 253 ntBASIC4.6□□□□□ -1.67
CNGA1P29973 AL670379.8-201ENST00000605353 252 ntBASIC4.6□□□□□ -1.67
CNGA1P29973 AL670379.7-201ENST00000605823 252 ntBASIC4.6□□□□□ -1.67
CNGA1P29973 AL121992.2-201ENST00000606262 256 ntBASIC4.6□□□□□ -1.67
CNGA1P29973 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.6□□□□□ -1.67
CNGA1P29973 AL357559.1-201ENST00000622228 274 ntBASIC4.6□□□□□ -1.67
CNGA1P29973 FP236240.3-201ENST00000623061 327 ntBASIC4.6□□□□□ -1.67
CNGA1P29973 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.6□□□□□ -1.67
CNGA1P29973 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CNGA1P29973 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNGA1P29973 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CNGA1P29973 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CNGA1P29973 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CNGA1P29973 RNU5A-1-201ENST00000362698 116 ntBASIC4.59□□□□□ -1.67
CNGA1P29973 RNU4-12P-201ENST00000365233 139 ntBASIC4.59□□□□□ -1.67
CNGA1P29973 Y_RNA.450-201ENST00000384198 113 ntBASIC4.59□□□□□ -1.67
CNGA1P29973 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.59□□□□□ -1.67
CNGA1P29973 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.59□□□□□ -1.67
CNGA1P29973 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.59□□□□□ -1.67
CNGA1P29973 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.59□□□□□ -1.67
CNGA1P29973 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.59□□□□□ -1.67
CNGA1P29973 AC106872.2-201ENST00000494303 480 ntBASIC4.59□□□□□ -1.67
CNGA1P29973 AC010342.1-201ENST00000514047 877 ntBASIC4.59□□□□□ -1.67
CNGA1P29973 RNU6-718P-201ENST00000516166 105 ntBASIC4.59□□□□□ -1.67
CNGA1P29973 RNU6-390P-201ENST00000516259 103 ntBASIC4.59□□□□□ -1.67
CNGA1P29973 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.59□□□□□ -1.67
CNGA1P29973 OR5AQ1P-201ENST00000527596 927 ntBASIC4.59□□□□□ -1.67
CNGA1P29973 OR4R1P-201ENST00000529879 463 ntBASIC4.59□□□□□ -1.67
CNGA1P29973 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.59□□□□□ -1.67
CNGA1P29973 RPS3AP4-201ENST00000555161 764 ntBASIC4.59□□□□□ -1.67
CNGA1P29973 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.59□□□□□ -1.67
CNGA1P29973 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.59□□□□□ -1.67
CNGA1P29973 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.59□□□□□ -1.67
CNGA1P29973 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CNGA1P29973 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.59□□□□□ -1.67
CNGA1P29973 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.59□□□□□ -1.67
CNGA1P29973 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CNGA1P29973 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CNGA1P29973 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
CNGA1P29973 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CNGA1P29973 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CNGA1P29973 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNGA1P29973 ZNF680P1-201ENST00000436625 1469 ntBASIC4.58□□□□□ -1.68
CNGA1P29973 GABPAP-201ENST00000419271 1356 ntBASIC4.58□□□□□ -1.68
CNGA1P29973 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CNGA1P29973 AL603766.1-201ENST00000407763 664 ntBASIC4.58□□□□□ -1.68
CNGA1P29973 RNU2-39P-201ENST00000410604 198 ntBASIC4.58□□□□□ -1.68
CNGA1P29973 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.58□□□□□ -1.68
CNGA1P29973 RPL36AP6-201ENST00000435770 321 ntBASIC4.58□□□□□ -1.68
CNGA1P29973 RPL23AP89-201ENST00000439324 255 ntBASIC4.58□□□□□ -1.68
CNGA1P29973 MTATP6P30-201ENST00000443540 664 ntBASIC4.58□□□□□ -1.68
CNGA1P29973 AC020550.1-201ENST00000447385 163 ntBASIC4.58□□□□□ -1.68
CNGA1P29973 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.58□□□□□ -1.68
CNGA1P29973 RPL29P14-201ENST00000495837 428 ntBASIC4.58□□□□□ -1.68
CNGA1P29973 AC139783.2-201ENST00000504847 1145 ntBASIC4.58□□□□□ -1.68
CNGA1P29973 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.58□□□□□ -1.68
CNGA1P29973 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.58□□□□□ -1.68
CNGA1P29973 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.58□□□□□ -1.68
CNGA1P29973 AP001646.1-201ENST00000527936 915 ntBASIC4.58□□□□□ -1.68
CNGA1P29973 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CNGA1P29973 CYCSP30-201ENST00000546447 172 ntBASIC4.58□□□□□ -1.68
CNGA1P29973 AL157687.1-201ENST00000554853 619 ntBASIC4.58□□□□□ -1.68
CNGA1P29973 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.58□□□□□ -1.68
CNGA1P29973 HMGB1P6-201ENST00000569046 646 ntBASIC4.58□□□□□ -1.68
CNGA1P29973 MIR3921-201ENST00000577308 85 ntBASIC4.58□□□□□ -1.68
CNGA1P29973 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.58□□□□□ -1.68
CNGA1P29973 MIR5684-201ENST00000585074 65 ntBASIC4.58□□□□□ -1.68
CNGA1P29973 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CNGA1P29973 BDH2P1-201ENST00000602288 736 ntBASIC4.58□□□□□ -1.68
CNGA1P29973 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.58□□□□□ -1.68
CNGA1P29973 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CNGA1P29973 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNGA1P29973 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNGA1P29973 AL137003.2-201ENST00000606924 2538 ntBASIC4.57□□□□□ -1.68
CNGA1P29973 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.57□□□□□ -1.68
CNGA1P29973 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.57□□□□□ -1.68
CNGA1P29973 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.57□□□□□ -1.68
CNGA1P29973 SNORD35B-201ENST00000363660 87 ntBASIC4.57□□□□□ -1.68
CNGA1P29973 RNU6-188P-201ENST00000364207 107 ntBASIC4.57□□□□□ -1.68
CNGA1P29973 Y_RNA.481-201ENST00000384373 102 ntBASIC4.57□□□□□ -1.68
CNGA1P29973 AC068050.1-201ENST00000394891 380 ntBASIC4.57□□□□□ -1.68
CNGA1P29973 NDUFS5P1-201ENST00000405668 289 ntBASIC4.57□□□□□ -1.68
CNGA1P29973 BTF3P7-201ENST00000407097 488 ntBASIC4.57□□□□□ -1.68
CNGA1P29973 RNU2-9P-201ENST00000410194 145 ntBASIC4.57□□□□□ -1.68
CNGA1P29973 RNU2-71P-201ENST00000411395 189 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms