Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RXRBP28702 MIR548I3-201ENST00000408378 149 ntBASIC5.51□□□□□ -1.53
RXRBP28702 MIR548I1-201ENST00000408810 149 ntBASIC5.51□□□□□ -1.53
RXRBP28702 RPL37P10-201ENST00000412884 288 ntBASIC5.51□□□□□ -1.53
RXRBP28702 AL035423.1-201ENST00000420331 213 ntBASIC5.51□□□□□ -1.53
RXRBP28702 OR4K11P-201ENST00000431829 904 ntBASIC5.51□□□□□ -1.53
RXRBP28702 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.51□□□□□ -1.53
RXRBP28702 AC083904.1-201ENST00000487828 231 ntBASIC5.51□□□□□ -1.53
RXRBP28702 AC104164.2-201ENST00000496953 495 ntBASIC5.51□□□□□ -1.53
RXRBP28702 AC092436.1-201ENST00000506450 503 ntBASIC5.51□□□□□ -1.53
RXRBP28702 HMGN1P11-201ENST00000508668 303 ntBASIC5.51□□□□□ -1.53
RXRBP28702 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.51□□□□□ -1.53
RXRBP28702 AC026801.2-201ENST00000515352 425 ntBASIC5.51□□□□□ -1.53
RXRBP28702 RNU6-488P-201ENST00000515918 99 ntBASIC5.51□□□□□ -1.53
RXRBP28702 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.51□□□□□ -1.53
RXRBP28702 AC022655.2-201ENST00000577280 318 ntBASIC5.51□□□□□ -1.53
RXRBP28702 OR4K8P-201ENST00000578842 1048 ntBASIC5.51□□□□□ -1.53
RXRBP28702 UBE2L4-201ENST00000587688 464 ntBASIC5.51□□□□□ -1.53
RXRBP28702 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.51□□□□□ -1.53
RXRBP28702 AL031666.3-201ENST00000609320 1006 ntBASIC5.51□□□□□ -1.53
RXRBP28702 AC083806.3-201ENST00000614016 455 ntBASIC5.51□□□□□ -1.53
RXRBP28702 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RXRBP28702 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
RXRBP28702 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RXRBP28702 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.51□□□□□ -1.53
RXRBP28702 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RXRBP28702 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RXRBP28702 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RXRBP28702 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RXRBP28702 AC000374.1-201ENST00000434698 1745 ntBASIC5.51□□□□□ -1.53
RXRBP28702 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RXRBP28702 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.51□□□□□ -1.53
RXRBP28702 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RXRBP28702 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
RXRBP28702 AC107068.1-201ENST00000563286 4218 ntBASIC5.5□□□□□ -1.53
RXRBP28702 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.5□□□□□ -1.53
RXRBP28702 SMG1P4-204ENST00000523028 4131 ntBASIC5.5□□□□□ -1.53
RXRBP28702 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RXRBP28702 AL731532.2-201ENST00000623542 1953 ntBASIC5.5□□□□□ -1.53
RXRBP28702 Y_RNA.135-201ENST00000363439 95 ntBASIC5.5□□□□□ -1.53
RXRBP28702 RNU6-1013P-201ENST00000384180 107 ntBASIC5.5□□□□□ -1.53
RXRBP28702 MIR454-201ENST00000390180 115 ntBASIC5.5□□□□□ -1.53
RXRBP28702 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RXRBP28702 AC012065.2-201ENST00000421295 375 ntBASIC5.5□□□□□ -1.53
RXRBP28702 SKA2P1-201ENST00000425592 390 ntBASIC5.5□□□□□ -1.53
RXRBP28702 AL669831.1-202ENST00000428504 417 ntBASIC5.5□□□□□ -1.53
RXRBP28702 FABP5P14-201ENST00000437273 393 ntBASIC5.5□□□□□ -1.53
RXRBP28702 TXNP1-201ENST00000441872 371 ntBASIC5.5□□□□□ -1.53
RXRBP28702 AC005229.2-201ENST00000456995 399 ntBASIC5.5□□□□□ -1.53
RXRBP28702 Y_RNA.653-201ENST00000459091 95 ntBASIC5.5□□□□□ -1.53
RXRBP28702 AC055855.1-201ENST00000489563 579 ntBASIC5.5□□□□□ -1.53
RXRBP28702 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.5□□□□□ -1.53
RXRBP28702 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.5□□□□□ -1.53
RXRBP28702 UBE2CP3-201ENST00000502715 450 ntBASIC5.5□□□□□ -1.53
RXRBP28702 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.5□□□□□ -1.53
RXRBP28702 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.5□□□□□ -1.53
RXRBP28702 AC107222.1-201ENST00000510899 637 ntBASIC5.5□□□□□ -1.53
RXRBP28702 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.5□□□□□ -1.53
RXRBP28702 AC105031.1-201ENST00000518550 476 ntBASIC5.5□□□□□ -1.53
RXRBP28702 RANP9-201ENST00000519957 271 ntBASIC5.5□□□□□ -1.53
RXRBP28702 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RXRBP28702 CYCSP28-201ENST00000534284 321 ntBASIC5.5□□□□□ -1.53
RXRBP28702 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.5□□□□□ -1.53
RXRBP28702 IMMP1LP2-201ENST00000552954 492 ntBASIC5.5□□□□□ -1.53
RXRBP28702 MYL12BP1-201ENST00000569826 507 ntBASIC5.5□□□□□ -1.53
RXRBP28702 AF038458.1-201ENST00000588406 262 ntBASIC5.5□□□□□ -1.53
RXRBP28702 FAM157A-202ENST00000615155 405 ntBASIC5.5□□□□□ -1.53
RXRBP28702 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RXRBP28702 AC008013.2-202ENST00000637965 364 ntBASIC5.5□□□□□ -1.53
RXRBP28702 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RXRBP28702 ZNF807-201ENST00000328088 1707 ntBASIC5.5□□□□□ -1.53
RXRBP28702 AC083843.3-201ENST00000623679 2186 ntBASIC5.5□□□□□ -1.53
RXRBP28702 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
RXRBP28702 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
RXRBP28702 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.5□□□□□ -1.53
RXRBP28702 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RXRBP28702 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RXRBP28702 AC074029.4-201ENST00000624796 1859 ntBASIC5.49□□□□□ -1.53
RXRBP28702 NXPH1-205ENST00000602349 1953 ntBASIC5.49□□□□□ -1.53
RXRBP28702 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.49□□□□□ -1.53
RXRBP28702 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RXRBP28702 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RXRBP28702 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RXRBP28702 DEFB109C-201ENST00000382575 264 ntBASIC5.49□□□□□ -1.53
RXRBP28702 DEFB109B-201ENST00000382656 264 ntBASIC5.49□□□□□ -1.53
RXRBP28702 Y_RNA.527-201ENST00000384573 102 ntBASIC5.49□□□□□ -1.53
RXRBP28702 AL359643.1-201ENST00000404109 423 ntBASIC5.49□□□□□ -1.53
RXRBP28702 RNU6ATAC10P-201ENST00000408635 111 ntBASIC5.49□□□□□ -1.53
RXRBP28702 RNU4-61P-201ENST00000411243 107 ntBASIC5.49□□□□□ -1.53
RXRBP28702 AC048351.1-201ENST00000420064 602 ntBASIC5.49□□□□□ -1.53
RXRBP28702 TBCAP1-201ENST00000436520 327 ntBASIC5.49□□□□□ -1.53
RXRBP28702 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.49□□□□□ -1.53
RXRBP28702 RPL7P28-201ENST00000437739 740 ntBASIC5.49□□□□□ -1.53
RXRBP28702 HMGB1P12-201ENST00000438594 598 ntBASIC5.49□□□□□ -1.53
RXRBP28702 AC104058.1-201ENST00000448028 297 ntBASIC5.49□□□□□ -1.53
RXRBP28702 RNU7-180P-201ENST00000459240 63 ntBASIC5.49□□□□□ -1.53
RXRBP28702 MIR2053-201ENST00000459295 91 ntBASIC5.49□□□□□ -1.53
RXRBP28702 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.49□□□□□ -1.53
RXRBP28702 RN7SL601P-201ENST00000471221 293 ntBASIC5.49□□□□□ -1.53
RXRBP28702 RPL23AP11-201ENST00000475260 469 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms