Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.08□□□□□ -1.76
CD40P25942 AL360271.2-201ENST00000447710 161 ntBASIC4.08□□□□□ -1.76
CD40P25942 AL645939.1-201ENST00000453429 797 ntBASIC4.08□□□□□ -1.76
CD40P25942 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.08□□□□□ -1.76
CD40P25942 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.08□□□□□ -1.76
CD40P25942 AC104472.2-201ENST00000469035 601 ntBASIC4.08□□□□□ -1.76
CD40P25942 S100A11P1-201ENST00000477525 312 ntBASIC4.08□□□□□ -1.76
CD40P25942 MTND5P5-201ENST00000503764 376 ntBASIC4.08□□□□□ -1.76
CD40P25942 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
CD40P25942 AC008526.1-201ENST00000509149 338 ntBASIC4.08□□□□□ -1.76
CD40P25942 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CD40P25942 RAB9BP1-201ENST00000519581 626 ntBASIC4.08□□□□□ -1.76
CD40P25942 RNU6-323P-201ENST00000521915 107 ntBASIC4.08□□□□□ -1.76
CD40P25942 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.08□□□□□ -1.76
CD40P25942 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.08□□□□□ -1.76
CD40P25942 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.08□□□□□ -1.76
CD40P25942 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.08□□□□□ -1.76
CD40P25942 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.08□□□□□ -1.76
CD40P25942 AC106900.2-201ENST00000604994 317 ntBASIC4.08□□□□□ -1.76
CD40P25942 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.08□□□□□ -1.76
CD40P25942 AL138726.1-201ENST00000614873 333 ntBASIC4.08□□□□□ -1.76
CD40P25942 AC015813.6-201ENST00000624409 5808 ntBASIC4.08□□□□□ -1.76
CD40P25942 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.08□□□□□ -1.76
CD40P25942 MIR7641-1-201ENST00000627518 61 ntBASIC4.08□□□□□ -1.76
CD40P25942 AC008013.2-202ENST00000637965 364 ntBASIC4.08□□□□□ -1.76
CD40P25942 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CD40P25942 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD40P25942 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD40P25942 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD40P25942 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.08□□□□□ -1.76
CD40P25942 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.08□□□□□ -1.76
CD40P25942 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD40P25942 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD40P25942 AC107068.1-201ENST00000563286 4218 ntBASIC4.07□□□□□ -1.76
CD40P25942 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.07□□□□□ -1.76
CD40P25942 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CD40P25942 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.07□□□□□ -1.76
CD40P25942 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CD40P25942 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CD40P25942 SNORD113.2-201ENST00000364166 89 ntBASIC4.07□□□□□ -1.76
CD40P25942 RNA5SP167-201ENST00000365461 116 ntBASIC4.07□□□□□ -1.76
CD40P25942 RNU6-1227P-201ENST00000383981 107 ntBASIC4.07□□□□□ -1.76
CD40P25942 AL590762.2-201ENST00000395798 571 ntBASIC4.07□□□□□ -1.76
CD40P25942 Z98745.1-201ENST00000402553 494 ntBASIC4.07□□□□□ -1.76
CD40P25942 RNU6-1304P-201ENST00000411374 106 ntBASIC4.07□□□□□ -1.76
CD40P25942 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.07□□□□□ -1.76
CD40P25942 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.07□□□□□ -1.76
CD40P25942 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.07□□□□□ -1.76
CD40P25942 CYP4F29P-201ENST00000420685 446 ntBASIC4.07□□□□□ -1.76
CD40P25942 MTCO2P27-201ENST00000420740 428 ntBASIC4.07□□□□□ -1.76
CD40P25942 FTH1P6-201ENST00000430768 320 ntBASIC4.07□□□□□ -1.76
CD40P25942 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.07□□□□□ -1.76
CD40P25942 RPS24P13-201ENST00000442520 397 ntBASIC4.07□□□□□ -1.76
CD40P25942 RPL32P28-201ENST00000443577 397 ntBASIC4.07□□□□□ -1.76
CD40P25942 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.07□□□□□ -1.76
CD40P25942 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.07□□□□□ -1.76
CD40P25942 AC009220.1-201ENST00000451614 275 ntBASIC4.07□□□□□ -1.76
CD40P25942 RPS20P22-201ENST00000473700 357 ntBASIC4.07□□□□□ -1.76
CD40P25942 AP000926.1-201ENST00000479573 241 ntBASIC4.07□□□□□ -1.76
CD40P25942 RPS27P27-201ENST00000498779 255 ntBASIC4.07□□□□□ -1.76
CD40P25942 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.07□□□□□ -1.76
CD40P25942 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.07□□□□□ -1.76
CD40P25942 MTND3P25-201ENST00000509243 135 ntBASIC4.07□□□□□ -1.76
CD40P25942 AC005921.1-201ENST00000510589 286 ntBASIC4.07□□□□□ -1.76
CD40P25942 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.07□□□□□ -1.76
CD40P25942 RN7SKP13-201ENST00000515933 244 ntBASIC4.07□□□□□ -1.76
CD40P25942 RNU6-1332P-201ENST00000516666 104 ntBASIC4.07□□□□□ -1.76
CD40P25942 CYCSP27-201ENST00000527643 293 ntBASIC4.07□□□□□ -1.76
CD40P25942 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.07□□□□□ -1.76
CD40P25942 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.07□□□□□ -1.76
CD40P25942 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.07□□□□□ -1.76
CD40P25942 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.07□□□□□ -1.76
CD40P25942 AL121821.2-201ENST00000556081 394 ntBASIC4.07□□□□□ -1.76
CD40P25942 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.07□□□□□ -1.76
CD40P25942 AC007151.1-201ENST00000572774 483 ntBASIC4.07□□□□□ -1.76
CD40P25942 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CD40P25942 AC068790.4-201ENST00000602474 263 ntBASIC4.07□□□□□ -1.76
CD40P25942 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.07□□□□□ -1.76
CD40P25942 AC002044.1-201ENST00000606707 158 ntBASIC4.07□□□□□ -1.76
CD40P25942 AL355365.1-201ENST00000616480 294 ntBASIC4.07□□□□□ -1.76
CD40P25942 AL023881.1-201ENST00000621088 301 ntBASIC4.07□□□□□ -1.76
CD40P25942 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CD40P25942 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CD40P25942 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.07□□□□□ -1.76
CD40P25942 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.07□□□□□ -1.76
CD40P25942 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CD40P25942 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CD40P25942 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CD40P25942 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CD40P25942 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.06□□□□□ -1.76
CD40P25942 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CD40P25942 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CD40P25942 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.06□□□□□ -1.76
CD40P25942 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CD40P25942 ZNF137P-201ENST00000456718 1920 ntBASIC4.06□□□□□ -1.76
CD40P25942 SNORA63-201ENST00000363450 132 ntBASIC4.06□□□□□ -1.76
CD40P25942 RNU1-32P-201ENST00000363937 159 ntBASIC4.06□□□□□ -1.76
CD40P25942 RNU6-266P-201ENST00000364225 107 ntBASIC4.06□□□□□ -1.76
CD40P25942 RNA5SP189-201ENST00000364920 115 ntBASIC4.06□□□□□ -1.76
CD40P25942 SNORA71.2-201ENST00000364941 134 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms