Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VCLP18206 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
VCLP18206 MIR483-201ENST00000385070 76 ntBASIC3.09□□□□□ -1.91
VCLP18206 RPL7P25-201ENST00000404151 721 ntBASIC3.09□□□□□ -1.91
VCLP18206 TXNP7-201ENST00000406296 293 ntBASIC3.09□□□□□ -1.91
VCLP18206 RPL7P10-201ENST00000417407 739 ntBASIC3.09□□□□□ -1.91
VCLP18206 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.09□□□□□ -1.91
VCLP18206 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.09□□□□□ -1.91
VCLP18206 AL354941.1-201ENST00000438600 464 ntBASIC3.09□□□□□ -1.91
VCLP18206 SNRPGP6-201ENST00000451124 220 ntBASIC3.09□□□□□ -1.91
VCLP18206 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.09□□□□□ -1.91
VCLP18206 AL109741.2-201ENST00000455561 343 ntBASIC3.09□□□□□ -1.91
VCLP18206 AC092798.1-201ENST00000458542 409 ntBASIC3.09□□□□□ -1.91
VCLP18206 AC135721.1-201ENST00000497954 479 ntBASIC3.09□□□□□ -1.91
VCLP18206 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.09□□□□□ -1.91
VCLP18206 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.09□□□□□ -1.91
VCLP18206 RNU6-1282P-201ENST00000516735 96 ntBASIC3.09□□□□□ -1.91
VCLP18206 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
VCLP18206 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
VCLP18206 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.09□□□□□ -1.91
VCLP18206 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.09□□□□□ -1.91
VCLP18206 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.09□□□□□ -1.91
VCLP18206 AC090888.2-201ENST00000559765 1144 ntBASIC3.09□□□□□ -1.91
VCLP18206 AC009097.3-201ENST00000563557 1018 ntBASIC3.09□□□□□ -1.91
VCLP18206 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.09□□□□□ -1.91
VCLP18206 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.09□□□□□ -1.91
VCLP18206 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.09□□□□□ -1.91
VCLP18206 BNIP3P23-201ENST00000599655 511 ntBASIC3.09□□□□□ -1.91
VCLP18206 AC234772.3-201ENST00000602277 528 ntBASIC3.09□□□□□ -1.91
VCLP18206 AC013553.2-201ENST00000604244 589 ntBASIC3.09□□□□□ -1.91
VCLP18206 AP000240.1-201ENST00000609910 452 ntBASIC3.09□□□□□ -1.91
VCLP18206 AC093838.1-201ENST00000613014 469 ntBASIC3.09□□□□□ -1.91
VCLP18206 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
VCLP18206 OR5H6-203ENST00000642105 978 ntBASIC3.09□□□□□ -1.91
VCLP18206 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.09□□□□□ -1.91
VCLP18206 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
VCLP18206 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
VCLP18206 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VCLP18206 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.08□□□□□ -1.92
VCLP18206 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VCLP18206 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.08□□□□□ -1.92
VCLP18206 SNORD113-6-201ENST00000363345 75 ntBASIC3.08□□□□□ -1.92
VCLP18206 CD24P4-201ENST00000382840 243 ntBASIC3.08□□□□□ -1.92
VCLP18206 AL359704.1-201ENST00000411586 781 ntBASIC3.08□□□□□ -1.92
VCLP18206 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.08□□□□□ -1.92
VCLP18206 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.08□□□□□ -1.92
VCLP18206 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.08□□□□□ -1.92
VCLP18206 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.08□□□□□ -1.92
VCLP18206 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VCLP18206 UBE2FP3-201ENST00000436366 524 ntBASIC3.08□□□□□ -1.92
VCLP18206 RSU1P2-202ENST00000437884 485 ntBASIC3.08□□□□□ -1.92
VCLP18206 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.08□□□□□ -1.92
VCLP18206 AL162389.1-201ENST00000449233 177 ntBASIC3.08□□□□□ -1.92
VCLP18206 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.08□□□□□ -1.92
VCLP18206 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.08□□□□□ -1.92
VCLP18206 ATG12P2-201ENST00000456830 416 ntBASIC3.08□□□□□ -1.92
VCLP18206 AP1S2P1-201ENST00000457344 379 ntBASIC3.08□□□□□ -1.92
VCLP18206 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.08□□□□□ -1.92
VCLP18206 SETP11-201ENST00000473027 690 ntBASIC3.08□□□□□ -1.92
VCLP18206 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.08□□□□□ -1.92
VCLP18206 RN7SKP43-201ENST00000516173 320 ntBASIC3.08□□□□□ -1.92
VCLP18206 RN7SKP265-201ENST00000516448 223 ntBASIC3.08□□□□□ -1.92
VCLP18206 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.08□□□□□ -1.92
VCLP18206 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.08□□□□□ -1.92
VCLP18206 AP001372.4-201ENST00000524889 472 ntBASIC3.08□□□□□ -1.92
VCLP18206 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.08□□□□□ -1.92
VCLP18206 AP002404.1-201ENST00000532005 451 ntBASIC3.08□□□□□ -1.92
VCLP18206 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.08□□□□□ -1.92
VCLP18206 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.08□□□□□ -1.92
VCLP18206 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.08□□□□□ -1.92
VCLP18206 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.08□□□□□ -1.92
VCLP18206 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.08□□□□□ -1.92
VCLP18206 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.08□□□□□ -1.92
VCLP18206 AC012119.1-201ENST00000603184 222 ntBASIC3.08□□□□□ -1.92
VCLP18206 AL139344.1-201ENST00000605228 195 ntBASIC3.08□□□□□ -1.92
VCLP18206 AC013244.3-201ENST00000605614 388 ntBASIC3.08□□□□□ -1.92
VCLP18206 TUG1_2.1-201ENST00000614234 87 ntBASIC3.08□□□□□ -1.92
VCLP18206 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.08□□□□□ -1.92
VCLP18206 AP000676.3-201ENST00000623299 569 ntBASIC3.08□□□□□ -1.92
VCLP18206 AC090617.7-201ENST00000623952 126 ntBASIC3.08□□□□□ -1.92
VCLP18206 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.08□□□□□ -1.92
VCLP18206 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VCLP18206 MAPK10-322ENST00000641485 4530 ntBASIC3.08□□□□□ -1.92
VCLP18206 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.08□□□□□ -1.92
VCLP18206 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VCLP18206 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VCLP18206 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
VCLP18206 Y_RNA.18-201ENST00000362461 102 ntBASIC3.07□□□□□ -1.92
VCLP18206 RNU6-799P-201ENST00000363567 107 ntBASIC3.07□□□□□ -1.92
VCLP18206 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
VCLP18206 RNU6-1027P-201ENST00000383998 107 ntBASIC3.07□□□□□ -1.92
VCLP18206 SNORA9-201ENST00000384215 133 ntBASIC3.07□□□□□ -1.92
VCLP18206 HMGB1P11-201ENST00000413899 637 ntBASIC3.07□□□□□ -1.92
VCLP18206 UBE2FP1-201ENST00000416536 447 ntBASIC3.07□□□□□ -1.92
VCLP18206 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.07□□□□□ -1.92
VCLP18206 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.07□□□□□ -1.92
VCLP18206 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.07□□□□□ -1.92
VCLP18206 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.07□□□□□ -1.92
VCLP18206 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.07□□□□□ -1.92
VCLP18206 AL512844.2-201ENST00000433990 593 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms