Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNU6-254P-201ENST00000363377 107 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 SNORA71.2-201ENST00000364941 134 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
COL6A2P12110 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.47□□□□□ -1.69
COL6A2P12110 Y_RNA.399-201ENST00000383955 105 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 RNU6-701P-201ENST00000384059 107 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 RNU6-474P-201ENST00000384243 107 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 MIR559-201ENST00000385188 96 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
COL6A2P12110 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL6A2P12110 AL109941.1-201ENST00000401925 229 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 RNU2-43P-201ENST00000410306 190 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 RNU4-14P-201ENST00000410858 122 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.47□□□□□ -1.69
COL6A2P12110 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.47□□□□□ -1.69
COL6A2P12110 MTND2P23-201ENST00000422990 651 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 CYCSP43-201ENST00000438233 310 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 AC006466.1-201ENST00000438721 289 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.47□□□□□ -1.69
COL6A2P12110 AL121871.1-201ENST00000443413 436 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 AC107399.1-201ENST00000451226 265 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.47□□□□□ -1.69
COL6A2P12110 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.47□□□□□ -1.69
COL6A2P12110 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.47□□□□□ -1.69
COL6A2P12110 PPBPP1-201ENST00000510807 373 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.47□□□□□ -1.69
COL6A2P12110 RNU6-327P-201ENST00000516270 127 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 RNU4-60P-201ENST00000517239 135 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.47□□□□□ -1.69
COL6A2P12110 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.47□□□□□ -1.69
COL6A2P12110 AC090281.1-201ENST00000523019 276 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 AP006587.4-201ENST00000526053 529 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 OR5D15P-201ENST00000531671 942 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 RPL23AP97-201ENST00000568955 471 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 MIR3667-201ENST00000581025 74 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 MIR3171-201ENST00000584270 74 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 MIR3672-201ENST00000584290 82 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 AC006116.10-201ENST00000591836 581 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 AC092747.3-201ENST00000603769 301 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 DPPA3P3-201ENST00000603842 430 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 AC104662.1-201ENST00000604448 511 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 AL360085.1-201ENST00000604713 532 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 AC012409.4-201ENST00000612923 249 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 AL589994.2-201ENST00000621124 579 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL6A2P12110 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL6A2P12110 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL6A2P12110 AC027290.2-201ENST00000623210 18662 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 AL133412.1-201ENST00000380194 2992 ntBASIC4.47□□□□□ -1.69
COL6A2P12110 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.46□□□□□ -1.69
COL6A2P12110 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.46□□□□□ -1.69
COL6A2P12110 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
COL6A2P12110 SDAD1P1-202ENST00000524156 2051 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL6A2P12110 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.46□□□□□ -1.7
COL6A2P12110 RNA5SP191-201ENST00000362585 102 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 SNORA4.3-201ENST00000365564 137 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL6A2P12110 Y_RNA.422-201ENST00000384054 114 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 SNORA51.8-201ENST00000384234 132 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 MIR93-201ENST00000385024 80 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 RNY4P36-201ENST00000391116 96 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 MIR548F5-201ENST00000408421 86 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.46□□□□□ -1.7
COL6A2P12110 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.46□□□□□ -1.7
COL6A2P12110 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.46□□□□□ -1.7
COL6A2P12110 AC012671.1-201ENST00000451912 203 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.46□□□□□ -1.7
COL6A2P12110 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.46□□□□□ -1.7
COL6A2P12110 RPL7P43-201ENST00000478876 753 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 AC027575.1-201ENST00000481064 460 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.46□□□□□ -1.7
COL6A2P12110 AC005741.1-201ENST00000511094 432 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.46□□□□□ -1.7
COL6A2P12110 RNA5SP154-201ENST00000516193 111 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 RNU6-256P-201ENST00000516747 97 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 RNA5SP454-201ENST00000517231 127 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.46□□□□□ -1.7
COL6A2P12110 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.46□□□□□ -1.7
COL6A2P12110 ELOCP31-201ENST00000540463 467 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 AP000763.2-201ENST00000540641 163 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 AL163153.1-201ENST00000554223 283 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 MTCO3P23-201ENST00000561363 289 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.46□□□□□ -1.7
COL6A2P12110 AC023043.2-201ENST00000589678 1026 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.46□□□□□ -1.7
COL6A2P12110 SNRPGP17-201ENST00000603780 214 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 AL138889.2-201ENST00000603883 242 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 AC009570.1-201ENST00000609599 745 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.46□□□□□ -1.7
COL6A2P12110 MIR6820-201ENST00000611508 62 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.46□□□□□ -1.7
COL6A2P12110 MIR6853-201ENST00000619642 74 ntBASIC4.46□□□□□ -1.7
COL6A2P12110 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.46□□□□□ -1.7
COL6A2P12110 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL6A2P12110 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
COL6A2P12110 AC087190.4-201ENST00000574616 8334 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL6A2P12110 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL6A2P12110 RNU1-15P-201ENST00000353977 144 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms