Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 BX323014.1-201ENST00000412876 237 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 RPL21P24-201ENST00000413752 448 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AL356583.2-201ENST00000426536 280 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AL356867.1-201ENST00000429623 299 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AC006028.1-201ENST00000438379 402 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 MTCO3P45-201ENST00000443036 613 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 MRPS31P2-201ENST00000451581 518 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 RNA5SP310-201ENST00000459084 116 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AC010401.1-201ENST00000463867 348 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 RPS27AP1-201ENST00000475545 471 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AL049830.2-201ENST00000480072 201 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 RPL21P13-201ENST00000488305 481 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AC060788.1-201ENST00000521318 469 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 DEFB108A-201ENST00000530110 222 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AL355836.1-201ENST00000555951 870 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 RPL21P12-201ENST00000559810 515 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AC005951.2-201ENST00000576282 495 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 MIR4276-201ENST00000584832 70 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AL359999.1-201ENST00000604513 294 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AC005000.2-201ENST00000605468 310 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AC008962.1-201ENST00000605729 304 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AC103710.1-201ENST00000610003 901 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 MIR7112-201ENST00000616126 65 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 MIR8057-201ENST00000620957 69 ntBASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RAB40ALP0C0E4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AL136164.4-201ENST00000625013 2135 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 ELL2P3-201ENST00000457883 1602 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 RNU1-75P-201ENST00000347264 129 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 SNORD115.1-201ENST00000391109 76 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 Z92545.1-201ENST00000411782 234 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AC017079.2-201ENST00000416102 485 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 USP9YP13-201ENST00000417797 480 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AC244035.1-201ENST00000430042 390 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 TIMM9P1-201ENST00000436122 256 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AC129850.1-201ENST00000436203 508 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 NDUFB4P6-201ENST00000436819 366 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 MTATP6P26-201ENST00000445926 662 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 SNRPGP9-201ENST00000456025 225 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AC092754.2-201ENST00000463506 460 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AC084357.1-201ENST00000473404 255 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 RPS4XP22-201ENST00000480755 780 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 FCF1P3-201ENST00000496394 590 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 RNU6-390P-201ENST00000516259 103 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AP002748.2-201ENST00000528671 348 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AC026333.2-201ENST00000542164 106 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 CKS1BP3-201ENST00000600888 237 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AC112191.3-201ENST00000604371 277 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AC108747.1-201ENST00000609508 535 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AC073114.1-201ENST00000612027 490 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 SDR42E1P2-201ENST00000614861 481 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AC002076.2-201ENST00000617362 122 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AC025048.6-202ENST00000627667 438 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AC073073.2-201ENST00000609827 2578 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 CUL1P1-201ENST00000509510 2425 ntBASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
RAB40ALP0C0E4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms