Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.55□□□□□ -2.16
CXCL1P09341 MTCYBP27-201ENST00000555160 670 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 AC095057.3-201ENST00000567102 1157 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 MIR5571-201ENST00000577998 113 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 AC010928.2-201ENST00000588017 287 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.55□□□□□ -2.16
CXCL1P09341 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.55□□□□□ -2.16
CXCL1P09341 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.55□□□□□ -2.16
CXCL1P09341 AL022067.1-201ENST00000602426 454 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 AC024220.1-201ENST00000603675 484 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 AC120053.1-201ENST00000607706 736 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 AL161423.1-201ENST00000613700 262 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 AC073569.3-201ENST00000619055 682 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 AC004777.1-201ENST00000624317 287 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 OR1S1-201ENST00000624470 978 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.55□□□□□ -2.16
CXCL1P09341 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CXCL1P09341 OR4G11P-202ENST00000642116 1414 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
CXCL1P09341 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
CXCL1P09341 RNA5SP171-201ENST00000391071 115 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 SNORA48.7-201ENST00000391302 135 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.54□□□□□ -2.16
CXCL1P09341 HMGB1P49-201ENST00000418882 569 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.54□□□□□ -2.16
CXCL1P09341 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.54□□□□□ -2.16
CXCL1P09341 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.54□□□□□ -2.16
CXCL1P09341 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.54□□□□□ -2.16
CXCL1P09341 PSPHP1-201ENST00000450062 261 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 RPL23AP23-201ENST00000452590 471 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 KLF3P2-201ENST00000465138 268 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 RNU4-29P-201ENST00000515943 174 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 RNU6-416P-201ENST00000516265 103 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.54□□□□□ -2.16
CXCL1P09341 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.54□□□□□ -2.16
CXCL1P09341 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.54□□□□□ -2.16
CXCL1P09341 AC124293.1-201ENST00000530034 493 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.54□□□□□ -2.16
CXCL1P09341 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.54□□□□□ -2.16
CXCL1P09341 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.54□□□□□ -2.16
CXCL1P09341 AL391261.3-201ENST00000557194 520 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 AC087465.1-201ENST00000560574 245 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CXCL1P09341 BPTFP1-201ENST00000579209 492 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 AL020997.3-201ENST00000602843 359 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 AL096840.1-201ENST00000603287 93 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 MIR7106-201ENST00000612419 65 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 AC135507.2-201ENST00000612443 309 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 AL158801.5-201ENST00000623123 465 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 AP003400.5-201ENST00000624827 617 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.54□□□□□ -2.16
CXCL1P09341 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CXCL1P09341 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CXCL1P09341 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CXCL1P09341 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CXCL1P09341 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CXCL1P09341 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.54□□□□□ -2.16
CXCL1P09341 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CXCL1P09341 MTND5P11-201ENST00000511037 1812 ntBASIC1.54□□□□□ -2.16
CXCL1P09341 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
CXCL1P09341 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CXCL1P09341 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
CXCL1P09341 SNORD46.1-201ENST00000364139 104 ntBASIC1.53□□□□□ -2.16
CXCL1P09341 RNU6-234P-201ENST00000365229 104 ntBASIC1.53□□□□□ -2.16
CXCL1P09341 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
CXCL1P09341 RNU2-15P-201ENST00000410692 191 ntBASIC1.53□□□□□ -2.16
CXCL1P09341 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.53□□□□□ -2.16
CXCL1P09341 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.53□□□□□ -2.16
CXCL1P09341 AC005002.1-201ENST00000447458 540 ntBASIC1.53□□□□□ -2.16
CXCL1P09341 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.53□□□□□ -2.16
CXCL1P09341 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.53□□□□□ -2.16
CXCL1P09341 CABYRP1-201ENST00000465493 1045 ntBASIC1.53□□□□□ -2.16
CXCL1P09341 AC022483.1-201ENST00000514020 567 ntBASIC1.53□□□□□ -2.16
CXCL1P09341 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.53□□□□□ -2.16
CXCL1P09341 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.53□□□□□ -2.16
CXCL1P09341 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.53□□□□□ -2.16
CXCL1P09341 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
CXCL1P09341 FAM92A1P1-201ENST00000528023 890 ntBASIC1.53□□□□□ -2.16
CXCL1P09341 CR383656.7-201ENST00000548164 174 ntBASIC1.53□□□□□ -2.16
CXCL1P09341 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.53□□□□□ -2.16
CXCL1P09341 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.53□□□□□ -2.16
CXCL1P09341 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.53□□□□□ -2.16
CXCL1P09341 AC025165.5-201ENST00000602802 578 ntBASIC1.53□□□□□ -2.16
CXCL1P09341 AL109918.3-201ENST00000603072 338 ntBASIC1.53□□□□□ -2.16
CXCL1P09341 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.53□□□□□ -2.16
CXCL1P09341 KATNBL1P1-201ENST00000605192 748 ntBASIC1.53□□□□□ -2.16
CXCL1P09341 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
CXCL1P09341 AC006213.4-201ENST00000616184 634 ntBASIC1.53□□□□□ -2.16
CXCL1P09341 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.53□□□□□ -2.16
CXCL1P09341 AC025034.2-201ENST00000623264 286 ntBASIC1.53□□□□□ -2.16
CXCL1P09341 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.17
CXCL1P09341 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.52□□□□□ -2.17
CXCL1P09341 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CXCL1P09341 AC007785.2-201ENST00000598627 1916 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CXCL1P09341 RNU6-525P-201ENST00000363685 104 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CXCL1P09341 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CXCL1P09341 VN1R51P-201ENST00000411675 945 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms