Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.15□□□□□ -1.91
VIMP08670 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.15□□□□□ -1.91
VIMP08670 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.15□□□□□ -1.91
VIMP08670 AC068790.3-201ENST00000602988 553 ntBASIC3.15□□□□□ -1.91
VIMP08670 AC018638.7-201ENST00000605836 1114 ntBASIC3.15□□□□□ -1.91
VIMP08670 AL355472.4-201ENST00000610233 626 ntBASIC3.15□□□□□ -1.91
VIMP08670 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VIMP08670 AL157817.1-201ENST00000614264 790 ntBASIC3.15□□□□□ -1.91
VIMP08670 AP003122.6-201ENST00000623831 495 ntBASIC3.15□□□□□ -1.91
VIMP08670 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
VIMP08670 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VIMP08670 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VIMP08670 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VIMP08670 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VIMP08670 RNA5SP274-201ENST00000410484 108 ntBASIC3.14□□□□□ -1.91
VIMP08670 AC078974.1-201ENST00000411597 223 ntBASIC3.14□□□□□ -1.91
VIMP08670 RPL19P1-201ENST00000411635 428 ntBASIC3.14□□□□□ -1.91
VIMP08670 SPA17P1-201ENST00000416656 452 ntBASIC3.14□□□□□ -1.91
VIMP08670 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.14□□□□□ -1.91
VIMP08670 AL512844.2-201ENST00000433990 593 ntBASIC3.14□□□□□ -1.91
VIMP08670 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.14□□□□□ -1.91
VIMP08670 UBE2D3P1-201ENST00000436669 444 ntBASIC3.14□□□□□ -1.91
VIMP08670 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VIMP08670 UBBP3-201ENST00000445497 241 ntBASIC3.14□□□□□ -1.91
VIMP08670 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.14□□□□□ -1.91
VIMP08670 AC010099.1-201ENST00000455434 375 ntBASIC3.14□□□□□ -1.91
VIMP08670 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.14□□□□□ -1.91
VIMP08670 RNU7-125P-201ENST00000458760 62 ntBASIC3.14□□□□□ -1.91
VIMP08670 AC008481.1-201ENST00000463278 396 ntBASIC3.14□□□□□ -1.91
VIMP08670 AC068587.2-201ENST00000478386 781 ntBASIC3.14□□□□□ -1.91
VIMP08670 LARP1BP2-201ENST00000486594 519 ntBASIC3.14□□□□□ -1.91
VIMP08670 AC111000.2-201ENST00000507775 550 ntBASIC3.14□□□□□ -1.91
VIMP08670 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.14□□□□□ -1.91
VIMP08670 AC116347.2-201ENST00000514912 523 ntBASIC3.14□□□□□ -1.91
VIMP08670 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.14□□□□□ -1.91
VIMP08670 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.14□□□□□ -1.91
VIMP08670 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.14□□□□□ -1.91
VIMP08670 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.14□□□□□ -1.91
VIMP08670 AC083760.1-201ENST00000589621 670 ntBASIC3.14□□□□□ -1.91
VIMP08670 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.14□□□□□ -1.91
VIMP08670 AP000403.1-201ENST00000603349 851 ntBASIC3.14□□□□□ -1.91
VIMP08670 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.14□□□□□ -1.91
VIMP08670 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.14□□□□□ -1.91
VIMP08670 AC004223.4-201ENST00000612426 332 ntBASIC3.14□□□□□ -1.91
VIMP08670 SDR42E1P2-201ENST00000614861 481 ntBASIC3.14□□□□□ -1.91
VIMP08670 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
VIMP08670 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
VIMP08670 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.14□□□□□ -1.91
VIMP08670 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VIMP08670 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VIMP08670 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
VIMP08670 AC007785.2-201ENST00000598627 1916 ntBASIC3.13□□□□□ -1.91
VIMP08670 U8.11-201ENST00000384699 133 ntBASIC3.13□□□□□ -1.91
VIMP08670 U8.12-201ENST00000384701 133 ntBASIC3.13□□□□□ -1.91
VIMP08670 SNORD17-201ENST00000390930 237 ntBASIC3.13□□□□□ -1.91
VIMP08670 RPL21P17-201ENST00000397467 475 ntBASIC3.13□□□□□ -1.91
VIMP08670 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VIMP08670 RPL21P24-201ENST00000413752 448 ntBASIC3.13□□□□□ -1.91
VIMP08670 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.13□□□□□ -1.91
VIMP08670 RPS27AP14-201ENST00000422868 454 ntBASIC3.13□□□□□ -1.91
VIMP08670 MTND5P25-201ENST00000430499 799 ntBASIC3.13□□□□□ -1.91
VIMP08670 AC007389.2-201ENST00000434630 306 ntBASIC3.13□□□□□ -1.91
VIMP08670 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.13□□□□□ -1.91
VIMP08670 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.13□□□□□ -1.91
VIMP08670 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.13□□□□□ -1.91
VIMP08670 NOTCH2P1-201ENST00000443481 624 ntBASIC3.13□□□□□ -1.91
VIMP08670 GDI2P2-201ENST00000445131 608 ntBASIC3.13□□□□□ -1.91
VIMP08670 CBWD4P-201ENST00000445695 655 ntBASIC3.13□□□□□ -1.91
VIMP08670 ELOCP30-201ENST00000447108 299 ntBASIC3.13□□□□□ -1.91
VIMP08670 RNU7-59P-201ENST00000459101 61 ntBASIC3.13□□□□□ -1.91
VIMP08670 U8.18-201ENST00000459285 133 ntBASIC3.13□□□□□ -1.91
VIMP08670 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.13□□□□□ -1.91
VIMP08670 RNU6-390P-201ENST00000516259 103 ntBASIC3.13□□□□□ -1.91
VIMP08670 RNU6-928P-201ENST00000516876 104 ntBASIC3.13□□□□□ -1.91
VIMP08670 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.13□□□□□ -1.91
VIMP08670 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.13□□□□□ -1.91
VIMP08670 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.13□□□□□ -1.91
VIMP08670 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
VIMP08670 HSPE1P20-201ENST00000538133 289 ntBASIC3.13□□□□□ -1.91
VIMP08670 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.13□□□□□ -1.91
VIMP08670 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.13□□□□□ -1.91
VIMP08670 GTF2IP22-201ENST00000554443 182 ntBASIC3.13□□□□□ -1.91
VIMP08670 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.13□□□□□ -1.91
VIMP08670 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.13□□□□□ -1.91
VIMP08670 AL606834.2-201ENST00000602954 668 ntBASIC3.13□□□□□ -1.91
VIMP08670 MTCYBP22-201ENST00000603788 447 ntBASIC3.13□□□□□ -1.91
VIMP08670 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.13□□□□□ -1.91
VIMP08670 U3.45-201ENST00000607547 219 ntBASIC3.13□□□□□ -1.91
VIMP08670 OR10AB1P-201ENST00000609613 938 ntBASIC3.13□□□□□ -1.91
VIMP08670 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.13□□□□□ -1.91
VIMP08670 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.13□□□□□ -1.91
VIMP08670 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.13□□□□□ -1.91
VIMP08670 AC097655.1-201ENST00000635075 318 ntBASIC3.13□□□□□ -1.91
VIMP08670 AL161431.1-201ENST00000618966 4205 ntBASIC3.13□□□□□ -1.91
VIMP08670 GABRG2-229ENST00000641017 3628 ntBASIC3.13□□□□□ -1.91
VIMP08670 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.13□□□□□ -1.91
VIMP08670 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VIMP08670 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VIMP08670 MAPK10-266ENST00000641066 6555 ntBASIC3.12□□□□□ -1.91
VIMP08670 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms