Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC103710.1-201ENST00000610003 901 ntBASIC3.73□□□□□ -1.81
MMP3P08254 AC109347.2-201ENST00000610220 349 ntBASIC3.73□□□□□ -1.81
MMP3P08254 BX664608.1-201ENST00000610519 487 ntBASIC3.73□□□□□ -1.81
MMP3P08254 AC009268.2-201ENST00000621925 457 ntBASIC3.73□□□□□ -1.81
MMP3P08254 LRRC77P-213ENST00000637727 880 ntBASIC3.73□□□□□ -1.81
MMP3P08254 OR5H6-203ENST00000642105 978 ntBASIC3.73□□□□□ -1.81
MMP3P08254 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
MMP3P08254 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
MMP3P08254 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.73□□□□□ -1.81
MMP3P08254 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
MMP3P08254 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.72□□□□□ -1.81
MMP3P08254 MTCO1P24-201ENST00000515438 1558 ntBASIC3.72□□□□□ -1.81
MMP3P08254 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
MMP3P08254 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
MMP3P08254 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MMP3P08254 FRG1BP-201ENST00000278882 761 ntBASIC3.72□□□□□ -1.81
MMP3P08254 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
MMP3P08254 Y_RNA.6-201ENST00000362350 114 ntBASIC3.72□□□□□ -1.81
MMP3P08254 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MMP3P08254 FCF1P9-201ENST00000412546 282 ntBASIC3.72□□□□□ -1.81
MMP3P08254 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.72□□□□□ -1.81
MMP3P08254 AL353678.1-201ENST00000422735 741 ntBASIC3.72□□□□□ -1.81
MMP3P08254 AL353777.1-201ENST00000425552 326 ntBASIC3.72□□□□□ -1.81
MMP3P08254 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.72□□□□□ -1.81
MMP3P08254 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.72□□□□□ -1.81
MMP3P08254 AC104850.1-201ENST00000435940 476 ntBASIC3.72□□□□□ -1.81
MMP3P08254 ARPC3P1-201ENST00000437218 533 ntBASIC3.72□□□□□ -1.81
MMP3P08254 AL451074.3-201ENST00000437709 472 ntBASIC3.72□□□□□ -1.81
MMP3P08254 AC108734.1-201ENST00000439549 399 ntBASIC3.72□□□□□ -1.81
MMP3P08254 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.72□□□□□ -1.81
MMP3P08254 AC079448.1-201ENST00000449377 373 ntBASIC3.72□□□□□ -1.81
MMP3P08254 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.72□□□□□ -1.81
MMP3P08254 AC093899.1-201ENST00000457984 376 ntBASIC3.72□□□□□ -1.81
MMP3P08254 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.72□□□□□ -1.81
MMP3P08254 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.72□□□□□ -1.81
MMP3P08254 AC107401.1-201ENST00000503426 685 ntBASIC3.72□□□□□ -1.81
MMP3P08254 NDUFB4P9-201ENST00000511646 388 ntBASIC3.72□□□□□ -1.81
MMP3P08254 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.72□□□□□ -1.81
MMP3P08254 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.72□□□□□ -1.81
MMP3P08254 AC107934.1-201ENST00000522215 217 ntBASIC3.72□□□□□ -1.81
MMP3P08254 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.72□□□□□ -1.81
MMP3P08254 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.72□□□□□ -1.81
MMP3P08254 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.72□□□□□ -1.81
MMP3P08254 MIR4513-201ENST00000581077 86 ntBASIC3.72□□□□□ -1.81
MMP3P08254 AC011816.2-201ENST00000607089 556 ntBASIC3.72□□□□□ -1.81
MMP3P08254 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.72□□□□□ -1.81
MMP3P08254 MIR6852-201ENST00000621699 66 ntBASIC3.72□□□□□ -1.81
MMP3P08254 AC091953.2-201ENST00000623979 160 ntBASIC3.72□□□□□ -1.81
MMP3P08254 AL160394.1-201ENST00000624765 724 ntBASIC3.72□□□□□ -1.81
MMP3P08254 AL159972.1-201ENST00000625150 448 ntBASIC3.72□□□□□ -1.81
MMP3P08254 PISRT1-201ENST00000626175 531 ntBASIC3.72□□□□□ -1.81
MMP3P08254 SEPT14P19-203ENST00000633205 211 ntBASIC3.72□□□□□ -1.81
MMP3P08254 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
MMP3P08254 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.72□□□□□ -1.81
MMP3P08254 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
MMP3P08254 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MMP3P08254 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.71□□□□□ -1.81
MMP3P08254 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
MMP3P08254 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
MMP3P08254 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MMP3P08254 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
MMP3P08254 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MMP3P08254 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.71□□□□□ -1.82
MMP3P08254 AP001486.2-201ENST00000561652 5113 ntBASIC3.71□□□□□ -1.82
MMP3P08254 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.71□□□□□ -1.82
MMP3P08254 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
MMP3P08254 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
MMP3P08254 RNU5E-1-201ENST00000362477 120 ntBASIC3.71□□□□□ -1.82
MMP3P08254 MIR124-3-201ENST00000384866 87 ntBASIC3.71□□□□□ -1.82
MMP3P08254 UBA52P6-201ENST00000399822 382 ntBASIC3.71□□□□□ -1.82
MMP3P08254 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.71□□□□□ -1.82
MMP3P08254 AL391417.1-201ENST00000404100 426 ntBASIC3.71□□□□□ -1.82
MMP3P08254 RNU4-47P-201ENST00000410876 114 ntBASIC3.71□□□□□ -1.82
MMP3P08254 AC007283.2-201ENST00000424739 197 ntBASIC3.71□□□□□ -1.82
MMP3P08254 OR4K11P-201ENST00000431829 904 ntBASIC3.71□□□□□ -1.82
MMP3P08254 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.71□□□□□ -1.82
MMP3P08254 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.71□□□□□ -1.82
MMP3P08254 AC055855.1-201ENST00000489563 579 ntBASIC3.71□□□□□ -1.82
MMP3P08254 AC006445.1-201ENST00000491925 405 ntBASIC3.71□□□□□ -1.82
MMP3P08254 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.71□□□□□ -1.82
MMP3P08254 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.71□□□□□ -1.82
MMP3P08254 RNU6-798P-201ENST00000516912 103 ntBASIC3.71□□□□□ -1.82
MMP3P08254 RNU6-201P-201ENST00000517100 61 ntBASIC3.71□□□□□ -1.82
MMP3P08254 MTND4LP26-201ENST00000518144 282 ntBASIC3.71□□□□□ -1.82
MMP3P08254 AC126177.3-201ENST00000551839 688 ntBASIC3.71□□□□□ -1.82
MMP3P08254 SETP7-201ENST00000552169 453 ntBASIC3.71□□□□□ -1.82
MMP3P08254 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.71□□□□□ -1.82
MMP3P08254 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.71□□□□□ -1.82
MMP3P08254 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.71□□□□□ -1.82
MMP3P08254 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.71□□□□□ -1.82
MMP3P08254 AC099489.2-201ENST00000574976 260 ntBASIC3.71□□□□□ -1.82
MMP3P08254 MIR3118-1-201ENST00000581787 76 ntBASIC3.71□□□□□ -1.82
MMP3P08254 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.71□□□□□ -1.82
MMP3P08254 RNU6-87P-201ENST00000607561 108 ntBASIC3.71□□□□□ -1.82
MMP3P08254 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MMP3P08254 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MMP3P08254 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.71□□□□□ -1.82
MMP3P08254 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.71□□□□□ -1.82
MMP3P08254 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
MMP3P08254 FARSBP1-201ENST00000435808 1778 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 211.1 ms