Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.55□□□□□ -1.84
RB1P06400 AC034105.3-201ENST00000565294 442 ntBASIC3.55□□□□□ -1.84
RB1P06400 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.55□□□□□ -1.84
RB1P06400 MIR3921-201ENST00000577308 85 ntBASIC3.55□□□□□ -1.84
RB1P06400 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.55□□□□□ -1.84
RB1P06400 AC083760.1-201ENST00000589621 670 ntBASIC3.55□□□□□ -1.84
RB1P06400 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.55□□□□□ -1.84
RB1P06400 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.55□□□□□ -1.84
RB1P06400 AC068790.3-201ENST00000602988 553 ntBASIC3.55□□□□□ -1.84
RB1P06400 AL031775.1-201ENST00000607014 887 ntBASIC3.55□□□□□ -1.84
RB1P06400 AP002826.1-201ENST00000608835 315 ntBASIC3.55□□□□□ -1.84
RB1P06400 AC004908.2-201ENST00000609090 574 ntBASIC3.55□□□□□ -1.84
RB1P06400 AC012360.2-201ENST00000609349 391 ntBASIC3.55□□□□□ -1.84
RB1P06400 OR10AB1P-201ENST00000609613 938 ntBASIC3.55□□□□□ -1.84
RB1P06400 AC008121.2-201ENST00000614647 523 ntBASIC3.55□□□□□ -1.84
RB1P06400 AL603758.1-201ENST00000618654 241 ntBASIC3.55□□□□□ -1.84
RB1P06400 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.55□□□□□ -1.84
RB1P06400 AC019226.1-201ENST00000625666 515 ntBASIC3.55□□□□□ -1.84
RB1P06400 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.55□□□□□ -1.84
RB1P06400 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.55□□□□□ -1.84
RB1P06400 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
RB1P06400 DDX10P1-201ENST00000448545 1933 ntBASIC3.54□□□□□ -1.84
RB1P06400 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RB1P06400 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RB1P06400 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.54□□□□□ -1.84
RB1P06400 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RB1P06400 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.54□□□□□ -1.84
RB1P06400 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RB1P06400 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RB1P06400 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
RB1P06400 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RB1P06400 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.54□□□□□ -1.84
RB1P06400 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RB1P06400 MT-TH-201ENST00000387441 69 ntBASIC3.54□□□□□ -1.84
RB1P06400 AL021407.1-201ENST00000404531 386 ntBASIC3.54□□□□□ -1.84
RB1P06400 AC078974.1-201ENST00000411597 223 ntBASIC3.54□□□□□ -1.84
RB1P06400 RPL17P12-201ENST00000413391 526 ntBASIC3.54□□□□□ -1.84
RB1P06400 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.54□□□□□ -1.84
RB1P06400 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.54□□□□□ -1.84
RB1P06400 RPL27AP8-201ENST00000424277 446 ntBASIC3.54□□□□□ -1.84
RB1P06400 SSXP4-201ENST00000451349 245 ntBASIC3.54□□□□□ -1.84
RB1P06400 RPS27AP8-201ENST00000452665 445 ntBASIC3.54□□□□□ -1.84
RB1P06400 RPS23P3-201ENST00000470993 430 ntBASIC3.54□□□□□ -1.84
RB1P06400 AP000797.1-201ENST00000478870 387 ntBASIC3.54□□□□□ -1.84
RB1P06400 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.54□□□□□ -1.84
RB1P06400 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.54□□□□□ -1.84
RB1P06400 FAM60DP-201ENST00000524174 632 ntBASIC3.54□□□□□ -1.84
RB1P06400 PSMA2P1-201ENST00000526365 646 ntBASIC3.54□□□□□ -1.84
RB1P06400 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.54□□□□□ -1.84
RB1P06400 AC055876.1-202ENST00000567053 138 ntBASIC3.54□□□□□ -1.84
RB1P06400 COX6CP3-201ENST00000580869 223 ntBASIC3.54□□□□□ -1.84
RB1P06400 AC067852.3-201ENST00000589177 561 ntBASIC3.54□□□□□ -1.84
RB1P06400 AC022146.1-201ENST00000595307 847 ntBASIC3.54□□□□□ -1.84
RB1P06400 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.54□□□□□ -1.84
RB1P06400 AC138932.5-201ENST00000617759 563 ntBASIC3.54□□□□□ -1.84
RB1P06400 AL138713.1-201ENST00000624026 2130 ntBASIC3.54□□□□□ -1.84
RB1P06400 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.54□□□□□ -1.84
RB1P06400 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.54□□□□□ -1.84
RB1P06400 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RB1P06400 ZNF826P-207ENST00000622273 1910 ntBASIC3.54□□□□□ -1.84
RB1P06400 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.54□□□□□ -1.84
RB1P06400 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RB1P06400 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.54□□□□□ -1.84
RB1P06400 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
RB1P06400 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.53□□□□□ -1.84
RB1P06400 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
RB1P06400 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RB1P06400 RNU5A-1-201ENST00000362698 116 ntBASIC3.53□□□□□ -1.84
RB1P06400 RNU6-223P-201ENST00000362830 107 ntBASIC3.53□□□□□ -1.84
RB1P06400 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RB1P06400 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RB1P06400 RNU6-533P-201ENST00000384144 107 ntBASIC3.53□□□□□ -1.84
RB1P06400 MIR19A-201ENST00000384878 82 ntBASIC3.53□□□□□ -1.84
RB1P06400 SNORA26.8-201ENST00000391306 124 ntBASIC3.53□□□□□ -1.84
RB1P06400 RPS20P2-201ENST00000402520 389 ntBASIC3.53□□□□□ -1.84
RB1P06400 RPL7P25-201ENST00000404151 721 ntBASIC3.53□□□□□ -1.84
RB1P06400 CCNG1P1-201ENST00000406783 885 ntBASIC3.53□□□□□ -1.84
RB1P06400 U3.42-201ENST00000408746 214 ntBASIC3.53□□□□□ -1.84
RB1P06400 NPM1P11-201ENST00000417106 855 ntBASIC3.53□□□□□ -1.84
RB1P06400 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.53□□□□□ -1.84
RB1P06400 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.53□□□□□ -1.84
RB1P06400 UBE2D3P2-201ENST00000424409 445 ntBASIC3.53□□□□□ -1.84
RB1P06400 RPL35AP12-201ENST00000425362 338 ntBASIC3.53□□□□□ -1.84
RB1P06400 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.53□□□□□ -1.84
RB1P06400 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.53□□□□□ -1.84
RB1P06400 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.53□□□□□ -1.84
RB1P06400 AL353705.1-201ENST00000433468 480 ntBASIC3.53□□□□□ -1.84
RB1P06400 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.53□□□□□ -1.84
RB1P06400 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.53□□□□□ -1.84
RB1P06400 AL049734.2-201ENST00000441066 616 ntBASIC3.53□□□□□ -1.84
RB1P06400 ATP5C1P1-201ENST00000441945 895 ntBASIC3.53□□□□□ -1.84
RB1P06400 AL162389.1-201ENST00000449233 177 ntBASIC3.53□□□□□ -1.84
RB1P06400 RN7SL863P-201ENST00000462370 296 ntBASIC3.53□□□□□ -1.84
RB1P06400 HSPE1P6-201ENST00000479457 291 ntBASIC3.53□□□□□ -1.84
RB1P06400 AC112204.1-201ENST00000502591 103 ntBASIC3.53□□□□□ -1.84
RB1P06400 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RB1P06400 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.53□□□□□ -1.84
RB1P06400 AL359273.1-201ENST00000510918 627 ntBASIC3.53□□□□□ -1.84
RB1P06400 AF131216.2-201ENST00000512316 564 ntBASIC3.53□□□□□ -1.84
RB1P06400 IGHV3-76-201ENST00000522465 295 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms