Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CYCSP39-201ENST00000565821 309 ntBASIC3.25□□□□□ -1.89
VTNP04004 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.25□□□□□ -1.89
VTNP04004 AC034268.2-201ENST00000571784 482 ntBASIC3.25□□□□□ -1.89
VTNP04004 MIR548AB-201ENST00000584917 84 ntBASIC3.25□□□□□ -1.89
VTNP04004 NBR2-204ENST00000587322 63 ntBASIC3.25□□□□□ -1.89
VTNP04004 AC004853.1-201ENST00000604902 698 ntBASIC3.25□□□□□ -1.89
VTNP04004 AC245008.1-201ENST00000608123 476 ntBASIC3.25□□□□□ -1.89
VTNP04004 AC090425.2-201ENST00000608818 501 ntBASIC3.25□□□□□ -1.89
VTNP04004 AC012360.2-201ENST00000609349 391 ntBASIC3.25□□□□□ -1.89
VTNP04004 AL158063.1-201ENST00000615349 536 ntBASIC3.25□□□□□ -1.89
VTNP04004 AC007998.5-201ENST00000622938 237 ntBASIC3.25□□□□□ -1.89
VTNP04004 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.25□□□□□ -1.89
VTNP04004 AC093591.3-201ENST00000634516 308 ntBASIC3.25□□□□□ -1.89
VTNP04004 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
VTNP04004 AF127577.6-201ENST00000623352 2191 ntBASIC3.25□□□□□ -1.89
VTNP04004 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VTNP04004 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.25□□□□□ -1.89
VTNP04004 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VTNP04004 RNU5F-6P-201ENST00000362979 116 ntBASIC3.24□□□□□ -1.89
VTNP04004 Y_RNA.234-201ENST00000364409 97 ntBASIC3.24□□□□□ -1.89
VTNP04004 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.24□□□□□ -1.89
VTNP04004 RPS27AP14-201ENST00000422868 454 ntBASIC3.24□□□□□ -1.89
VTNP04004 DUTP6-201ENST00000425573 462 ntBASIC3.24□□□□□ -1.89
VTNP04004 AL445669.1-201ENST00000426743 755 ntBASIC3.24□□□□□ -1.89
VTNP04004 AC244035.1-201ENST00000430042 390 ntBASIC3.24□□□□□ -1.89
VTNP04004 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
VTNP04004 TRIM60P18-201ENST00000441518 828 ntBASIC3.24□□□□□ -1.89
VTNP04004 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.24□□□□□ -1.89
VTNP04004 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
VTNP04004 AP000542.1-201ENST00000448473 371 ntBASIC3.24□□□□□ -1.89
VTNP04004 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VTNP04004 AC006539.3-201ENST00000454258 129 ntBASIC3.24□□□□□ -1.89
VTNP04004 SNRPGP9-201ENST00000456025 225 ntBASIC3.24□□□□□ -1.89
VTNP04004 RN7SL442P-201ENST00000473804 320 ntBASIC3.24□□□□□ -1.89
VTNP04004 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.24□□□□□ -1.89
VTNP04004 AC109486.1-201ENST00000486833 374 ntBASIC3.24□□□□□ -1.89
VTNP04004 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.24□□□□□ -1.89
VTNP04004 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.24□□□□□ -1.89
VTNP04004 AC022447.3-201ENST00000506865 495 ntBASIC3.24□□□□□ -1.89
VTNP04004 TXNP6-201ENST00000510190 310 ntBASIC3.24□□□□□ -1.89
VTNP04004 RN7SKP132-201ENST00000516001 208 ntBASIC3.24□□□□□ -1.89
VTNP04004 Y_RNA.695-201ENST00000516715 107 ntBASIC3.24□□□□□ -1.89
VTNP04004 RNU6-714P-201ENST00000516963 103 ntBASIC3.24□□□□□ -1.89
VTNP04004 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.24□□□□□ -1.89
VTNP04004 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.24□□□□□ -1.89
VTNP04004 GTF3AP2-201ENST00000557014 266 ntBASIC3.24□□□□□ -1.89
VTNP04004 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.24□□□□□ -1.89
VTNP04004 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.24□□□□□ -1.89
VTNP04004 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.24□□□□□ -1.89
VTNP04004 SNORD84-203ENST00000584275 78 ntBASIC3.24□□□□□ -1.89
VTNP04004 AC022146.1-201ENST00000595307 847 ntBASIC3.24□□□□□ -1.89
VTNP04004 AC119751.7-201ENST00000600494 245 ntBASIC3.24□□□□□ -1.89
VTNP04004 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
VTNP04004 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VTNP04004 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VTNP04004 AL021368.2-201ENST00000606125 5352 ntBASIC3.24□□□□□ -1.89
VTNP04004 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VTNP04004 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VTNP04004 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
VTNP04004 AC066616.2-201ENST00000559334 1481 ntBASIC3.23□□□□□ -1.89
VTNP04004 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VTNP04004 RNU4-21P-201ENST00000362802 126 ntBASIC3.23□□□□□ -1.89
VTNP04004 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.23□□□□□ -1.89
VTNP04004 RNU6-809P-201ENST00000384461 107 ntBASIC3.23□□□□□ -1.89
VTNP04004 MIR1305-201ENST00000408300 86 ntBASIC3.23□□□□□ -1.89
VTNP04004 SNORA11.2-201ENST00000408318 127 ntBASIC3.23□□□□□ -1.89
VTNP04004 RN7SKP266-201ENST00000410232 287 ntBASIC3.23□□□□□ -1.89
VTNP04004 RPS7P13-201ENST00000413955 498 ntBASIC3.23□□□□□ -1.89
VTNP04004 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.23□□□□□ -1.89
VTNP04004 AC099677.1-201ENST00000420575 175 ntBASIC3.23□□□□□ -1.89
VTNP04004 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.23□□□□□ -1.89
VTNP04004 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.23□□□□□ -1.89
VTNP04004 AC079780.1-201ENST00000428259 207 ntBASIC3.23□□□□□ -1.89
VTNP04004 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.23□□□□□ -1.89
VTNP04004 THAP5P1-201ENST00000439089 262 ntBASIC3.23□□□□□ -1.89
VTNP04004 AC093156.1-201ENST00000440382 670 ntBASIC3.23□□□□□ -1.89
VTNP04004 RPL7P36-201ENST00000444633 681 ntBASIC3.23□□□□□ -1.89
VTNP04004 AL360221.1-201ENST00000445989 335 ntBASIC3.23□□□□□ -1.89
VTNP04004 AL353691.1-201ENST00000451332 387 ntBASIC3.23□□□□□ -1.89
VTNP04004 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.23□□□□□ -1.89
VTNP04004 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.23□□□□□ -1.89
VTNP04004 MTND4LP3-201ENST00000468320 276 ntBASIC3.23□□□□□ -1.89
VTNP04004 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VTNP04004 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.23□□□□□ -1.89
VTNP04004 AC096751.1-202ENST00000502691 1067 ntBASIC3.23□□□□□ -1.89
VTNP04004 HIGD1AP13-201ENST00000509878 289 ntBASIC3.23□□□□□ -1.89
VTNP04004 AC004062.1-201ENST00000509926 645 ntBASIC3.23□□□□□ -1.89
VTNP04004 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.23□□□□□ -1.89
VTNP04004 MTCO2P32-201ENST00000514865 403 ntBASIC3.23□□□□□ -1.89
VTNP04004 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VTNP04004 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.23□□□□□ -1.89
VTNP04004 MIR4307-201ENST00000582802 84 ntBASIC3.23□□□□□ -1.89
VTNP04004 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.23□□□□□ -1.89
VTNP04004 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VTNP04004 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.23□□□□□ -1.89
VTNP04004 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.23□□□□□ -1.89
VTNP04004 AP001981.2-201ENST00000603241 418 ntBASIC3.23□□□□□ -1.89
VTNP04004 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.23□□□□□ -1.89
VTNP04004 AL590099.1-201ENST00000615276 138 ntBASIC3.23□□□□□ -1.89
VTNP04004 AL596245.1-201ENST00000618994 362 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms