Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.23□□□□□ -2.21
SPTA1P02549 SNX5P1-201ENST00000505757 1041 ntBASIC1.23□□□□□ -2.21
SPTA1P02549 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.23□□□□□ -2.21
SPTA1P02549 AC087373.1-201ENST00000524920 491 ntBASIC1.23□□□□□ -2.21
SPTA1P02549 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.23□□□□□ -2.21
SPTA1P02549 ZNF192P1-203ENST00000565888 810 ntBASIC1.23□□□□□ -2.21
SPTA1P02549 AC073413.2-201ENST00000604332 360 ntBASIC1.23□□□□□ -2.21
SPTA1P02549 AC090525.3-201ENST00000605601 189 ntBASIC1.23□□□□□ -2.21
SPTA1P02549 PABPC1P7-201ENST00000413177 1513 ntBASIC1.22□□□□□ -2.21
SPTA1P02549 EFTUD1P2-201ENST00000514817 1603 ntBASIC1.22□□□□□ -2.21
SPTA1P02549 MIR1304-201ENST00000408243 91 ntBASIC1.22□□□□□ -2.21
SPTA1P02549 MTND2P16-201ENST00000419987 799 ntBASIC1.22□□□□□ -2.21
SPTA1P02549 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.22□□□□□ -2.21
SPTA1P02549 SNRPFP2-201ENST00000440710 251 ntBASIC1.22□□□□□ -2.21
SPTA1P02549 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
SPTA1P02549 AL353718.1-201ENST00000451028 517 ntBASIC1.22□□□□□ -2.21
SPTA1P02549 AC105313.1-201ENST00000509121 353 ntBASIC1.22□□□□□ -2.21
SPTA1P02549 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.22□□□□□ -2.21
SPTA1P02549 DNAJC8P1-201ENST00000554535 372 ntBASIC1.22□□□□□ -2.21
SPTA1P02549 AL161713.1-201ENST00000555538 145 ntBASIC1.22□□□□□ -2.21
SPTA1P02549 TRAV28-201ENST00000557548 323 ntBASIC1.22□□□□□ -2.21
SPTA1P02549 AC090953.1-201ENST00000604305 1092 ntBASIC1.22□□□□□ -2.21
SPTA1P02549 AL356118.1-201ENST00000635272 1078 ntBASIC1.22□□□□□ -2.21
SPTA1P02549 MIR4278-201ENST00000636094 69 ntBASIC1.22□□□□□ -2.21
SPTA1P02549 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SPTA1P02549 SNORD114-27-201ENST00000363766 70 ntBASIC1.21□□□□□ -2.22
SPTA1P02549 Y_RNA.258-201ENST00000364613 105 ntBASIC1.21□□□□□ -2.22
SPTA1P02549 AC114973.1-201ENST00000429057 632 ntBASIC1.21□□□□□ -2.22
SPTA1P02549 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.21□□□□□ -2.22
SPTA1P02549 AC008427.1-201ENST00000503102 655 ntBASIC1.21□□□□□ -2.22
SPTA1P02549 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.21□□□□□ -2.22
SPTA1P02549 CR382285.2-201ENST00000624662 1495 ntBASIC1.21□□□□□ -2.22
SPTA1P02549 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SPTA1P02549 RNU4-91P-201ENST00000364778 135 ntBASIC1.21□□□□□ -2.22
SPTA1P02549 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SPTA1P02549 AC108059.3-201ENST00000456388 214 ntBASIC1.21□□□□□ -2.22
SPTA1P02549 RPS29P29-201ENST00000456396 171 ntBASIC1.21□□□□□ -2.22
SPTA1P02549 RNU6-1132P-201ENST00000459214 107 ntBASIC1.21□□□□□ -2.22
SPTA1P02549 RPL30P6-201ENST00000475925 342 ntBASIC1.21□□□□□ -2.22
SPTA1P02549 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.21□□□□□ -2.22
SPTA1P02549 AL049838.1-201ENST00000563647 981 ntBASIC1.21□□□□□ -2.22
SPTA1P02549 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.21□□□□□ -2.22
SPTA1P02549 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SPTA1P02549 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
SPTA1P02549 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.2□□□□□ -2.22
SPTA1P02549 SNORA40.6-201ENST00000391153 128 ntBASIC1.2□□□□□ -2.22
SPTA1P02549 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.2□□□□□ -2.22
SPTA1P02549 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.2□□□□□ -2.22
SPTA1P02549 AC104229.1-201ENST00000561364 255 ntBASIC1.2□□□□□ -2.22
SPTA1P02549 AC105245.1-201ENST00000581934 244 ntBASIC1.2□□□□□ -2.22
SPTA1P02549 CBX3P2-202ENST00000583365 535 ntBASIC1.2□□□□□ -2.22
SPTA1P02549 AL449363.1-201ENST00000617815 186 ntBASIC1.2□□□□□ -2.22
SPTA1P02549 AC006338.1-201ENST00000618453 749 ntBASIC1.2□□□□□ -2.22
SPTA1P02549 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SPTA1P02549 Y_RNA.60-201ENST00000362831 98 ntBASIC1.2□□□□□ -2.22
SPTA1P02549 SNORA18.2-201ENST00000383865 132 ntBASIC1.2□□□□□ -2.22
SPTA1P02549 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SPTA1P02549 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.2□□□□□ -2.22
SPTA1P02549 AC106901.1-201ENST00000425086 698 ntBASIC1.2□□□□□ -2.22
SPTA1P02549 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SPTA1P02549 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.2□□□□□ -2.22
SPTA1P02549 RPL21P39-201ENST00000463605 483 ntBASIC1.2□□□□□ -2.22
SPTA1P02549 RPL21P93-201ENST00000480465 489 ntBASIC1.2□□□□□ -2.22
SPTA1P02549 AC233702.1-201ENST00000482905 502 ntBASIC1.2□□□□□ -2.22
SPTA1P02549 AC093591.1-201ENST00000491435 481 ntBASIC1.2□□□□□ -2.22
SPTA1P02549 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
SPTA1P02549 HSPE1P14-201ENST00000605812 302 ntBASIC1.2□□□□□ -2.22
SPTA1P02549 AK6-205ENST00000618980 483 ntTSL 2 BASIC1.2□□□□□ -2.22
SPTA1P02549 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.2□□□□□ -2.22
SPTA1P02549 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.19□□□□□ -2.22
SPTA1P02549 RPS15AP7-201ENST00000439294 405 ntBASIC1.19□□□□□ -2.22
SPTA1P02549 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.19□□□□□ -2.22
SPTA1P02549 TPRKBP1-201ENST00000456243 481 ntBASIC1.19□□□□□ -2.22
SPTA1P02549 HMGB3P30-201ENST00000457863 606 ntBASIC1.19□□□□□ -2.22
SPTA1P02549 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.19□□□□□ -2.22
SPTA1P02549 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.19□□□□□ -2.22
SPTA1P02549 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC1.19□□□□□ -2.22
SPTA1P02549 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SPTA1P02549 AP000560.1-201ENST00000624150 1937 ntBASIC1.19□□□□□ -2.22
SPTA1P02549 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SPTA1P02549 VTRNA1-3-201ENST00000365645 89 ntBASIC1.19□□□□□ -2.22
SPTA1P02549 RNU1-101P-201ENST00000391171 127 ntBASIC1.19□□□□□ -2.22
SPTA1P02549 AL033519.2-201ENST00000403958 392 ntBASIC1.19□□□□□ -2.22
SPTA1P02549 NEFMP1-201ENST00000443423 1006 ntBASIC1.19□□□□□ -2.22
SPTA1P02549 AL109741.2-201ENST00000455561 343 ntBASIC1.19□□□□□ -2.22
SPTA1P02549 AC008837.2-201ENST00000513076 418 ntBASIC1.19□□□□□ -2.22
SPTA1P02549 CBX3P8-201ENST00000532412 525 ntBASIC1.19□□□□□ -2.22
SPTA1P02549 AC068714.1-201ENST00000559623 800 ntBASIC1.19□□□□□ -2.22
SPTA1P02549 SGO1P2-201ENST00000429458 1589 ntBASIC1.18□□□□□ -2.22
SPTA1P02549 AL596028.1-201ENST00000326971 197 ntBASIC1.18□□□□□ -2.22
SPTA1P02549 MIR124-3-201ENST00000384866 87 ntBASIC1.18□□□□□ -2.22
SPTA1P02549 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.18□□□□□ -2.22
SPTA1P02549 AC107032.1-201ENST00000485945 480 ntBASIC1.18□□□□□ -2.22
SPTA1P02549 LRRC34P2-201ENST00000514850 553 ntBASIC1.18□□□□□ -2.22
SPTA1P02549 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.18□□□□□ -2.22
SPTA1P02549 RPL26P37-201ENST00000411983 438 ntBASIC1.18□□□□□ -2.22
SPTA1P02549 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.18□□□□□ -2.22
SPTA1P02549 MTND1P23-201ENST00000416931 372 ntBASIC1.18□□□□□ -2.22
SPTA1P02549 AC099336.2-201ENST00000422457 254 ntBASIC1.18□□□□□ -2.22
SPTA1P02549 AL445669.1-201ENST00000426743 755 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms