Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 IGKV3-31-201ENST00000523109 329 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 AC104383.1-201ENST00000530297 370 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 AC005832.3-201ENST00000537929 631 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 GLYCAM1-201ENST00000546596 285 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 AC008126.1-201ENST00000549019 480 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.25□□□□□ -1.89
COL2A1P02458 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.25□□□□□ -1.89
COL2A1P02458 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.25□□□□□ -1.89
COL2A1P02458 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.25□□□□□ -1.89
COL2A1P02458 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.25□□□□□ -1.89
COL2A1P02458 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL2A1P02458 AC012065.4-201ENST00000602445 679 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 AC027807.2-201ENST00000616099 408 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 AC104260.1-201ENST00000616660 539 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.25□□□□□ -1.89
COL2A1P02458 AC109454.4-201ENST00000623411 649 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 AC099063.3-201ENST00000642066 185 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
COL2A1P02458 MTND5P26-201ENST00000426018 1752 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
COL2A1P02458 SNORD65.1-201ENST00000390889 71 ntBASIC3.24□□□□□ -1.89
COL2A1P02458 MTCO3P31-201ENST00000405526 789 ntBASIC3.24□□□□□ -1.89
COL2A1P02458 AC013404.1-201ENST00000413068 249 ntBASIC3.24□□□□□ -1.89
COL2A1P02458 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.24□□□□□ -1.89
COL2A1P02458 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.24□□□□□ -1.89
COL2A1P02458 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.24□□□□□ -1.89
COL2A1P02458 AL512286.1-201ENST00000439244 400 ntBASIC3.24□□□□□ -1.89
COL2A1P02458 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.24□□□□□ -1.89
COL2A1P02458 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COL2A1P02458 AC003071.1-201ENST00000451219 789 ntBASIC3.24□□□□□ -1.89
COL2A1P02458 SSXP1-201ENST00000453640 473 ntBASIC3.24□□□□□ -1.89
COL2A1P02458 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.24□□□□□ -1.89
COL2A1P02458 RN7SL75P-201ENST00000461926 281 ntBASIC3.24□□□□□ -1.89
COL2A1P02458 RPL9P6-201ENST00000492764 598 ntBASIC3.24□□□□□ -1.89
COL2A1P02458 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.24□□□□□ -1.89
COL2A1P02458 OR5H5P-201ENST00000503164 928 ntBASIC3.24□□□□□ -1.89
COL2A1P02458 KCTD9P5-201ENST00000504141 1170 ntBASIC3.24□□□□□ -1.89
COL2A1P02458 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.24□□□□□ -1.89
COL2A1P02458 AC008413.1-201ENST00000511864 177 ntBASIC3.24□□□□□ -1.89
COL2A1P02458 AF131216.2-201ENST00000512316 564 ntBASIC3.24□□□□□ -1.89
COL2A1P02458 AC116347.2-201ENST00000514912 523 ntBASIC3.24□□□□□ -1.89
COL2A1P02458 Y_RNA.702-201ENST00000516843 96 ntBASIC3.24□□□□□ -1.89
COL2A1P02458 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
COL2A1P02458 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.24□□□□□ -1.89
COL2A1P02458 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
COL2A1P02458 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.24□□□□□ -1.89
COL2A1P02458 MIR3913-1-201ENST00000577744 102 ntBASIC3.24□□□□□ -1.89
COL2A1P02458 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.24□□□□□ -1.89
COL2A1P02458 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.24□□□□□ -1.89
COL2A1P02458 AC107214.2-201ENST00000608204 634 ntBASIC3.24□□□□□ -1.89
COL2A1P02458 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COL2A1P02458 AC099654.14-201ENST00000638599 341 ntBASIC3.24□□□□□ -1.89
COL2A1P02458 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.24□□□□□ -1.89
COL2A1P02458 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL2A1P02458 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL2A1P02458 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
COL2A1P02458 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COL2A1P02458 ENSAP3-201ENST00000312710 333 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL2A1P02458 snosnR66.1-201ENST00000391095 99 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 RPL21P3-201ENST00000395517 478 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 CYCSP45-201ENST00000402289 315 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 AC004987.3-201ENST00000413879 771 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 OR51A5P-201ENST00000415429 942 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.23□□□□□ -1.89
COL2A1P02458 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.23□□□□□ -1.89
COL2A1P02458 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.23□□□□□ -1.89
COL2A1P02458 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.23□□□□□ -1.89
COL2A1P02458 AC073614.1-201ENST00000438690 650 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.23□□□□□ -1.89
COL2A1P02458 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.23□□□□□ -1.89
COL2A1P02458 IFNA11P-201ENST00000446352 526 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.23□□□□□ -1.89
COL2A1P02458 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.23□□□□□ -1.89
COL2A1P02458 AC146507.2-201ENST00000460608 476 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 AC146507.1-201ENST00000468335 354 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 OR4G11P-201ENST00000492842 939 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.23□□□□□ -1.89
COL2A1P02458 ANXA2P1-201ENST00000505539 926 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
COL2A1P02458 AC104108.1-201ENST00000509930 412 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
COL2A1P02458 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.23□□□□□ -1.89
COL2A1P02458 MTCYBP43-201ENST00000513621 740 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 SNORA31.21-201ENST00000517180 77 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 AF186190.1-201ENST00000517470 480 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.23□□□□□ -1.89
COL2A1P02458 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.23□□□□□ -1.89
COL2A1P02458 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COL2A1P02458 AC025260.1-201ENST00000548858 430 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 AC124947.2-202ENST00000552735 133 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 AC007424.1-203ENST00000554613 687 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.23□□□□□ -1.89
COL2A1P02458 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.23□□□□□ -1.89
COL2A1P02458 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.23□□□□□ -1.89
COL2A1P02458 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.23□□□□□ -1.89
COL2A1P02458 AC091488.1-201ENST00000604239 660 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 AP000860.1-201ENST00000605250 559 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 AC092954.2-201ENST00000609103 430 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms