Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 RNU6-282P-201ENST00000365357 103 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 Y_RNA.481-201ENST00000384373 102 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 MIR3074-201ENST00000384885 81 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.94□□□□□ -1.78
TOP3BO95985 RPL31P45-201ENST00000419532 356 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.94□□□□□ -1.78
TOP3BO95985 FTH1P6-201ENST00000430768 320 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.94□□□□□ -1.78
TOP3BO95985 RNU6-420P-201ENST00000458780 107 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 RPL39P36-201ENST00000490784 156 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.94□□□□□ -1.78
TOP3BO95985 MTCO3P9-201ENST00000506989 781 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.94□□□□□ -1.78
TOP3BO95985 Y_RNA.701-201ENST00000516812 110 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 RNU6-445P-201ENST00000516949 107 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 RN7SKP289-201ENST00000517244 295 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.94□□□□□ -1.78
TOP3BO95985 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.94□□□□□ -1.78
TOP3BO95985 AC125611.2-201ENST00000551907 647 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 HIF1AP1-201ENST00000553642 175 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 AC007424.1-203ENST00000554613 687 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.94□□□□□ -1.78
TOP3BO95985 RPS3AP23-202ENST00000574601 686 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 AC007621.1-201ENST00000604544 437 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 AC010680.4-201ENST00000605334 543 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 AC055876.5-201ENST00000605667 259 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 MIR98-201ENST00000606724 119 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 RNU6-87P-201ENST00000607561 108 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 AL161734.1-201ENST00000609720 557 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 AC135507.2-201ENST00000612443 309 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.94□□□□□ -1.78
TOP3BO95985 MIR6852-201ENST00000621699 66 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.94□□□□□ -1.78
TOP3BO95985 MIR4496-201ENST00000635896 61 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TOP3BO95985 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.94□□□□□ -1.78
TOP3BO95985 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TOP3BO95985 IPO8P1-201ENST00000455509 3109 ntBASIC3.94□□□□□ -1.78
TOP3BO95985 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TOP3BO95985 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
TOP3BO95985 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TOP3BO95985 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
TOP3BO95985 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TOP3BO95985 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
TOP3BO95985 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TOP3BO95985 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.93□□□□□ -1.78
TOP3BO95985 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.93□□□□□ -1.78
TOP3BO95985 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.93□□□□□ -1.78
TOP3BO95985 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TOP3BO95985 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TOP3BO95985 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
TOP3BO95985 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TOP3BO95985 RNU6-28P-201ENST00000362378 107 ntBASIC3.93□□□□□ -1.78
TOP3BO95985 Y_RNA.159-201ENST00000363674 87 ntBASIC3.93□□□□□ -1.78
TOP3BO95985 RPL7P25-201ENST00000404151 721 ntBASIC3.93□□□□□ -1.78
TOP3BO95985 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.93□□□□□ -1.78
TOP3BO95985 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.93□□□□□ -1.78
TOP3BO95985 AC007390.1-201ENST00000415722 356 ntBASIC3.93□□□□□ -1.78
TOP3BO95985 PSMA6P3-201ENST00000428242 164 ntBASIC3.93□□□□□ -1.78
TOP3BO95985 OR51AB1P-201ENST00000429046 620 ntBASIC3.93□□□□□ -1.78
TOP3BO95985 AL590233.1-201ENST00000430017 456 ntBASIC3.93□□□□□ -1.78
TOP3BO95985 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.93□□□□□ -1.78
TOP3BO95985 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.93□□□□□ -1.78
TOP3BO95985 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.93□□□□□ -1.78
TOP3BO95985 RPL7P54-201ENST00000438336 674 ntBASIC3.93□□□□□ -1.78
TOP3BO95985 HMGB3P12-201ENST00000438745 556 ntBASIC3.93□□□□□ -1.78
TOP3BO95985 AC127537.2-201ENST00000439258 465 ntBASIC3.93□□□□□ -1.78
TOP3BO95985 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.93□□□□□ -1.78
TOP3BO95985 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.93□□□□□ -1.78
TOP3BO95985 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.93□□□□□ -1.78
TOP3BO95985 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.93□□□□□ -1.78
TOP3BO95985 RPL37P6-202ENST00000464216 403 ntBASIC3.93□□□□□ -1.78
TOP3BO95985 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.93□□□□□ -1.78
TOP3BO95985 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.93□□□□□ -1.78
TOP3BO95985 HSPD1P15-201ENST00000505573 1122 ntBASIC3.93□□□□□ -1.78
TOP3BO95985 AC104619.4-201ENST00000510773 249 ntBASIC3.93□□□□□ -1.78
TOP3BO95985 RN7SKP234-201ENST00000517173 224 ntBASIC3.93□□□□□ -1.78
TOP3BO95985 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.93□□□□□ -1.78
TOP3BO95985 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.93□□□□□ -1.78
TOP3BO95985 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.93□□□□□ -1.78
TOP3BO95985 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.93□□□□□ -1.78
TOP3BO95985 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.93□□□□□ -1.78
TOP3BO95985 U3.45-201ENST00000607547 219 ntBASIC3.93□□□□□ -1.78
TOP3BO95985 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.93□□□□□ -1.78
TOP3BO95985 AC105429.2-201ENST00000610567 517 ntBASIC3.93□□□□□ -1.78
TOP3BO95985 MIR6868-201ENST00000611215 58 ntBASIC3.93□□□□□ -1.78
TOP3BO95985 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TOP3BO95985 AC006504.8-201ENST00000621046 635 ntBASIC3.93□□□□□ -1.78
TOP3BO95985 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TOP3BO95985 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TOP3BO95985 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
TOP3BO95985 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.92□□□□□ -1.78
TOP3BO95985 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.92□□□□□ -1.78
TOP3BO95985 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TOP3BO95985 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TOP3BO95985 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
TOP3BO95985 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TOP3BO95985 OR5J1P-201ENST00000313544 939 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 Y_RNA.46-201ENST00000362695 102 ntBASIC3.92□□□□□ -1.78
TOP3BO95985 RNY3P3-201ENST00000363816 102 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms