Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 COTL1P1-201ENST00000422309 375 ntBASIC3.82□□□□□ -1.8
DDX58O95786 AL356867.1-201ENST00000429623 299 ntBASIC3.82□□□□□ -1.8
DDX58O95786 RPL35AP22-201ENST00000436855 335 ntBASIC3.82□□□□□ -1.8
DDX58O95786 FAM103A2P-201ENST00000444122 354 ntBASIC3.82□□□□□ -1.8
DDX58O95786 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.82□□□□□ -1.8
DDX58O95786 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.82□□□□□ -1.8
DDX58O95786 RPF2P2-201ENST00000504693 896 ntBASIC3.82□□□□□ -1.8
DDX58O95786 AC109464.2-201ENST00000510242 943 ntBASIC3.82□□□□□ -1.8
DDX58O95786 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.82□□□□□ -1.8
DDX58O95786 RNU6-759P-201ENST00000516740 103 ntBASIC3.82□□□□□ -1.8
DDX58O95786 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.82□□□□□ -1.8
DDX58O95786 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.82□□□□□ -1.8
DDX58O95786 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.82□□□□□ -1.8
DDX58O95786 EIF4BP1-201ENST00000554881 351 ntBASIC3.82□□□□□ -1.8
DDX58O95786 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.82□□□□□ -1.8
DDX58O95786 MIR4474-201ENST00000579189 78 ntBASIC3.82□□□□□ -1.8
DDX58O95786 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.82□□□□□ -1.8
DDX58O95786 AC004223.4-201ENST00000612426 332 ntBASIC3.82□□□□□ -1.8
DDX58O95786 AL603755.1-201ENST00000619504 163 ntBASIC3.82□□□□□ -1.8
DDX58O95786 AC078883.4-201ENST00000623218 367 ntBASIC3.82□□□□□ -1.8
DDX58O95786 AL356266.1-201ENST00000623311 483 ntBASIC3.82□□□□□ -1.8
DDX58O95786 AC079248.2-201ENST00000623779 326 ntBASIC3.82□□□□□ -1.8
DDX58O95786 AC019226.1-201ENST00000625666 515 ntBASIC3.82□□□□□ -1.8
DDX58O95786 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.82□□□□□ -1.8
DDX58O95786 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
DDX58O95786 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
DDX58O95786 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
DDX58O95786 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.81□□□□□ -1.8
DDX58O95786 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
DDX58O95786 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
DDX58O95786 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
DDX58O95786 HMGB3P23-201ENST00000414981 585 ntBASIC3.81□□□□□ -1.8
DDX58O95786 RPL23AP39-201ENST00000415533 405 ntBASIC3.81□□□□□ -1.8
DDX58O95786 MTND2P18-201ENST00000419962 1030 ntBASIC3.81□□□□□ -1.8
DDX58O95786 USP9YP26-201ENST00000421008 661 ntBASIC3.81□□□□□ -1.8
DDX58O95786 AL590383.1-201ENST00000428602 75 ntBASIC3.81□□□□□ -1.8
DDX58O95786 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.81□□□□□ -1.8
DDX58O95786 ARF4P2-201ENST00000430209 526 ntBASIC3.81□□□□□ -1.8
DDX58O95786 TXNP1-201ENST00000441872 371 ntBASIC3.81□□□□□ -1.8
DDX58O95786 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.81□□□□□ -1.8
DDX58O95786 HSPE1P6-201ENST00000479457 291 ntBASIC3.81□□□□□ -1.8
DDX58O95786 RN7SL20P-201ENST00000488827 297 ntBASIC3.81□□□□□ -1.8
DDX58O95786 AL049874.1-201ENST00000489560 388 ntBASIC3.81□□□□□ -1.8
DDX58O95786 AC097462.2-201ENST00000504623 481 ntBASIC3.81□□□□□ -1.8
DDX58O95786 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.81□□□□□ -1.8
DDX58O95786 AP000889.1-201ENST00000530968 660 ntBASIC3.81□□□□□ -1.8
DDX58O95786 AL133271.1-201ENST00000538229 291 ntBASIC3.81□□□□□ -1.8
DDX58O95786 AC107016.2-201ENST00000547968 190 ntBASIC3.81□□□□□ -1.8
DDX58O95786 AL163153.1-201ENST00000554223 283 ntBASIC3.81□□□□□ -1.8
DDX58O95786 AC011260.1-201ENST00000578420 472 ntBASIC3.81□□□□□ -1.8
DDX58O95786 MTCYBP22-201ENST00000603788 447 ntBASIC3.81□□□□□ -1.8
DDX58O95786 AC009570.1-201ENST00000609599 745 ntBASIC3.81□□□□□ -1.8
DDX58O95786 AF246928.1-201ENST00000623768 87 ntBASIC3.81□□□□□ -1.8
DDX58O95786 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
DDX58O95786 AC092125.1-201ENST00000562568 1995 ntBASIC3.81□□□□□ -1.8
DDX58O95786 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
DDX58O95786 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
DDX58O95786 AC012321.1-201ENST00000561622 1588 ntBASIC3.8□□□□□ -1.8
DDX58O95786 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
DDX58O95786 AC009902.3-201ENST00000606235 2172 ntBASIC3.8□□□□□ -1.8
DDX58O95786 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.8□□□□□ -1.8
DDX58O95786 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
DDX58O95786 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
DDX58O95786 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.8□□□□□ -1.8
DDX58O95786 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.8□□□□□ -1.8
DDX58O95786 Y_RNA.111-201ENST00000363248 100 ntBASIC3.8□□□□□ -1.8
DDX58O95786 RNU5E-8P-201ENST00000363502 116 ntBASIC3.8□□□□□ -1.8
DDX58O95786 RNA5SP274-201ENST00000410484 108 ntBASIC3.8□□□□□ -1.8
DDX58O95786 AL365203.2-201ENST00000423444 196 ntBASIC3.8□□□□□ -1.8
DDX58O95786 PPP1R11P2-201ENST00000423543 382 ntBASIC3.8□□□□□ -1.8
DDX58O95786 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.8□□□□□ -1.8
DDX58O95786 AC008850.1-201ENST00000427546 362 ntBASIC3.8□□□□□ -1.8
DDX58O95786 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.8□□□□□ -1.8
DDX58O95786 AP1S2P1-201ENST00000457344 379 ntBASIC3.8□□□□□ -1.8
DDX58O95786 RN7SL330P-201ENST00000469709 307 ntBASIC3.8□□□□□ -1.8
DDX58O95786 RN7SL442P-201ENST00000473804 320 ntBASIC3.8□□□□□ -1.8
DDX58O95786 AL049873.1-201ENST00000480540 376 ntBASIC3.8□□□□□ -1.8
DDX58O95786 AC083906.5-201ENST00000503722 328 ntBASIC3.8□□□□□ -1.8
DDX58O95786 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.8□□□□□ -1.8
DDX58O95786 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.8□□□□□ -1.8
DDX58O95786 RPL23AP84-201ENST00000571193 464 ntBASIC3.8□□□□□ -1.8
DDX58O95786 AP001004.1-201ENST00000582468 324 ntBASIC3.8□□□□□ -1.8
DDX58O95786 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.8□□□□□ -1.8
DDX58O95786 AP000254.1-201ENST00000609934 520 ntBASIC3.8□□□□□ -1.8
DDX58O95786 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.8□□□□□ -1.8
DDX58O95786 AC092628.2-201ENST00000622492 339 ntBASIC3.8□□□□□ -1.8
DDX58O95786 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
DDX58O95786 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
DDX58O95786 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
DDX58O95786 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
DDX58O95786 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
DDX58O95786 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
DDX58O95786 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.79□□□□□ -1.8
DDX58O95786 RNU5F-7P-201ENST00000363696 115 ntBASIC3.79□□□□□ -1.8
DDX58O95786 RNU5A-2P-201ENST00000384337 116 ntBASIC3.79□□□□□ -1.8
DDX58O95786 RNU6-851P-201ENST00000384565 107 ntBASIC3.79□□□□□ -1.8
DDX58O95786 RNY3P9-201ENST00000384727 106 ntBASIC3.79□□□□□ -1.8
DDX58O95786 U3.26-201ENST00000391236 204 ntBASIC3.79□□□□□ -1.8
DDX58O95786 RPS4XP3-201ENST00000398541 413 ntBASIC3.79□□□□□ -1.8
DDX58O95786 AL122016.1-201ENST00000403365 367 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms