Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 MIR6733-201ENST00000635723 61 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CLDN9O95484 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.62□□□□□ -1.99
CLDN9O95484 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN9O95484 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN9O95484 Y_RNA.311-201ENST00000365068 96 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 RNU6-1035P-201ENST00000384477 107 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 RPL21P75-201ENST00000396599 483 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 RPL21P28-201ENST00000401418 483 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 AL138827.1-201ENST00000402666 306 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 AL592114.1-201ENST00000403842 483 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.62□□□□□ -1.99
CLDN9O95484 RPS3AP37-201ENST00000419176 745 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.62□□□□□ -1.99
CLDN9O95484 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.62□□□□□ -1.99
CLDN9O95484 AC112220.1-201ENST00000434628 355 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 AC129850.1-201ENST00000436203 508 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 RPL23AP20-201ENST00000447965 421 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 MTND1P31-201ENST00000449206 961 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.62□□□□□ -1.99
CLDN9O95484 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.62□□□□□ -1.99
CLDN9O95484 OR6K1P-201ENST00000456766 971 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 AC092798.1-201ENST00000458542 409 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 RPL21P39-201ENST00000463605 483 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 MTND4LP3-201ENST00000468320 276 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 RPL21P93-201ENST00000480465 489 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 AC233702.1-201ENST00000482905 502 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 AC087190.1-201ENST00000484462 480 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 AC093591.1-201ENST00000491435 481 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 RPL21P16-201ENST00000495531 483 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN9O95484 AP002748.2-201ENST00000528671 348 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 ELOCP31-201ENST00000540463 467 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 NBEAP1-201ENST00000554452 979 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 AL132857.1-201ENST00000555180 708 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN9O95484 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN9O95484 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.62□□□□□ -1.99
CLDN9O95484 AC020895.1-201ENST00000595362 272 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 DUXAP3-201ENST00000603616 594 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 SDAD1P2-201ENST00000441308 2028 ntBASIC2.62□□□□□ -1.99
CLDN9O95484 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CLDN9O95484 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CLDN9O95484 AC010680.1-201ENST00000590024 3590 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLDN9O95484 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLDN9O95484 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CLDN9O95484 RNU6-359P-201ENST00000365466 108 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 RNU6-637P-201ENST00000384050 107 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 AL356421.1-201ENST00000403255 413 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 AL136310.1-201ENST00000404926 654 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 Z85995.1-201ENST00000415547 335 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 AL953862.1-201ENST00000423016 168 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN9O95484 RPL7P37-201ENST00000425095 738 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 AC087499.2-201ENST00000432861 149 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN9O95484 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN9O95484 AC092155.2-201ENST00000454675 477 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 MTATP6P14-201ENST00000455189 673 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 AL109741.2-201ENST00000455561 343 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 MEMO1P3-201ENST00000459811 302 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 AC021382.1-201ENST00000483523 359 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CLDN9O95484 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN9O95484 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN9O95484 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN9O95484 AC098799.2-201ENST00000509466 868 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 AC109445.1-201ENST00000512356 383 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN9O95484 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN9O95484 MTCYBP23-201ENST00000558717 1102 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 CYCSP39-201ENST00000565821 309 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN9O95484 AC005951.2-201ENST00000576282 495 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 AL353997.4-201ENST00000586196 166 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN9O95484 MTND3P19-201ENST00000603825 345 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 AC006270.3-201ENST00000605967 1036 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 OR2AS2P-201ENST00000606902 342 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 AC109809.1-201ENST00000619665 545 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 AC068880.5-201ENST00000624331 290 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN9O95484 AC099654.7-201ENST00000635788 2127 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 AL049641.1-201ENST00000441055 1948 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 AC007785.2-201ENST00000598627 1916 ntBASIC2.61□□□□□ -1.99
CLDN9O95484 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLDN9O95484 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLDN9O95484 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLDN9O95484 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.61□□□□□ -1.99
CLDN9O95484 RNU6-289P-201ENST00000364093 107 ntBASIC2.6□□□□□ -1.99
CLDN9O95484 RNU6-621P-201ENST00000364752 109 ntBASIC2.6□□□□□ -1.99
CLDN9O95484 MIR592-201ENST00000384959 97 ntBASIC2.6□□□□□ -1.99
CLDN9O95484 UBE2V1P2-201ENST00000397758 440 ntBASIC2.6□□□□□ -1.99
CLDN9O95484 ERHP2-201ENST00000402323 299 ntBASIC2.6□□□□□ -1.99
CLDN9O95484 RNA5SP21-201ENST00000410917 96 ntBASIC2.6□□□□□ -1.99
CLDN9O95484 AL592148.1-201ENST00000413568 445 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms