Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
ABCA1O95477 AL512504.1-201ENST00000415494 778 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 AL357078.2-201ENST00000416486 427 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 AC234781.2-201ENST00000426370 994 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 ARPC3P1-201ENST00000437218 533 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 UBE2V1P5-201ENST00000440070 405 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 AL031659.1-201ENST00000447075 539 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.36□□□□□ -2.19
ABCA1O95477 NCOR1P1-202ENST00000486162 291 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 RNF138P1-201ENST00000502765 546 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.36□□□□□ -2.19
ABCA1O95477 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.36□□□□□ -2.19
ABCA1O95477 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.36□□□□□ -2.19
ABCA1O95477 AC092470.1-201ENST00000546187 132 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 AC008739.2-201ENST00000597006 317 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 AC117490.2-201ENST00000610042 594 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 AL512598.1-201ENST00000610158 273 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 uc_338.5-201ENST00000611839 155 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 AC068620.4-201ENST00000636730 1182 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.36□□□□□ -2.19
ABCA1O95477 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
ABCA1O95477 AL355596.1-201ENST00000565399 3996 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 MTATP6P31-201ENST00000406985 692 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 RPL7P30-201ENST00000420888 709 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 AL606495.1-201ENST00000422100 813 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.36□□□□□ -2.19
ABCA1O95477 LSM1P1-201ENST00000438629 273 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 Z99714.1-201ENST00000450463 807 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.36□□□□□ -2.19
ABCA1O95477 SETP11-201ENST00000473027 690 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.36□□□□□ -2.19
ABCA1O95477 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.36□□□□□ -2.19
ABCA1O95477 AC006499.2-201ENST00000513470 337 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 AC008494.2-201ENST00000514544 370 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 AC025755.1-201ENST00000521306 278 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 HSPE1P20-201ENST00000538133 289 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.36□□□□□ -2.19
ABCA1O95477 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.36□□□□□ -2.19
ABCA1O95477 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.36□□□□□ -2.19
ABCA1O95477 MIR4285-201ENST00000581001 85 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.36□□□□□ -2.19
ABCA1O95477 AC091057.2-201ENST00000602594 792 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 AC106791.2-201ENST00000604680 391 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 AC006249.1-201ENST00000621223 471 ntBASIC1.36□□□□□ -2.19
ABCA1O95477 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
ABCA1O95477 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 ZNF734P-201ENST00000419494 1534 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 RNU6-1180P-201ENST00000364935 107 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 ANAPC10P1-201ENST00000395991 556 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 AL136372.1-201ENST00000403060 228 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 RPL19P1-201ENST00000411635 428 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.35□□□□□ -2.19
ABCA1O95477 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.35□□□□□ -2.19
ABCA1O95477 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.35□□□□□ -2.19
ABCA1O95477 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.35□□□□□ -2.19
ABCA1O95477 BNIP3P2-201ENST00000441221 577 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 AC009238.1-201ENST00000442165 424 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 Z96811.1-201ENST00000445880 108 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 AC009237.6-201ENST00000446969 424 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.35□□□□□ -2.19
ABCA1O95477 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
ABCA1O95477 C1DP3-201ENST00000455013 423 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 MTND3P24-201ENST00000506306 329 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 ATP5EP1-201ENST00000510257 156 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 AC110792.2-201ENST00000510278 224 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 HMGB1P47-201ENST00000511281 589 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 Y_RNA.675-201ENST00000516389 149 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.35□□□□□ -2.19
ABCA1O95477 AC024614.2-201ENST00000577584 372 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 AC005296.1-201ENST00000616145 209 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 RNU1-42P-201ENST00000364033 160 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 Y_RNA.374-201ENST00000365606 101 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 RNU6-174P-201ENST00000410406 106 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 Z75741.2-201ENST00000417272 1167 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 RPS15AP40-201ENST00000419621 391 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.35□□□□□ -2.19
ABCA1O95477 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.35□□□□□ -2.19
ABCA1O95477 PPP1R2P5-201ENST00000457256 603 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
ABCA1O95477 CDC42P4-201ENST00000510507 563 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 RNU6-1004P-201ENST00000516584 111 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 AC125611.2-201ENST00000551907 647 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.35□□□□□ -2.19
ABCA1O95477 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.35□□□□□ -2.19
ABCA1O95477 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.35□□□□□ -2.19
ABCA1O95477 AL645939.4-201ENST00000604495 135 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 AC024560.3-201ENST00000608482 349 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 AL359740.1-201ENST00000624340 592 ntBASIC1.35□□□□□ -2.19
ABCA1O95477 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.35□□□□□ -2.19
ABCA1O95477 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
ABCA1O95477 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
ABCA1O95477 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
ABCA1O95477 UBE2L2-201ENST00000254302 429 ntBASIC1.34□□□□□ -2.2
ABCA1O95477 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
ABCA1O95477 MIR493-201ENST00000385254 89 ntBASIC1.34□□□□□ -2.2
ABCA1O95477 RNU6-837P-201ENST00000391056 108 ntBASIC1.34□□□□□ -2.2
ABCA1O95477 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.34□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms