Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 Y_RNA.326-201ENST00000365176 113 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 SNORA32.2-201ENST00000384049 122 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 U1.1-201ENST00000384101 164 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 MIR514A2-201ENST00000385131 88 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 MIR514A3-201ENST00000385132 88 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VAMP4O75379 RNU6-628P-201ENST00000410675 107 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 BTF3L4P3-201ENST00000418879 476 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.01□□□□□ -1.61
VAMP4O75379 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.01□□□□□ -1.61
VAMP4O75379 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.01□□□□□ -1.61
VAMP4O75379 AL138799.3-201ENST00000438968 350 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 Z95327.1-201ENST00000446082 482 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 AL121877.1-201ENST00000453704 622 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 RNU7-182P-201ENST00000459009 62 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.01□□□□□ -1.61
VAMP4O75379 HMGN1P10-201ENST00000474557 553 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 PPIAP15-201ENST00000479662 484 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.01□□□□□ -1.61
VAMP4O75379 AC068305.1-201ENST00000497406 726 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 RNU4-29P-201ENST00000515943 174 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 Y_RNA.691-201ENST00000516611 103 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 RN7SKP256-201ENST00000517201 314 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 BTF3P12-201ENST00000519620 469 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.01□□□□□ -1.61
VAMP4O75379 AL161713.1-201ENST00000555538 145 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 AC005668.1-201ENST00000571142 476 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 MIR4286-201ENST00000580651 93 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 AP001029.3-201ENST00000588063 596 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 AL121992.2-201ENST00000606262 256 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.01□□□□□ -1.61
VAMP4O75379 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
VAMP4O75379 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VAMP4O75379 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.01□□□□□ -1.61
VAMP4O75379 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VAMP4O75379 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5□□□□□ -1.61
VAMP4O75379 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VAMP4O75379 AL645937.1-201ENST00000641739 1652 ntBASIC5□□□□□ -1.61
VAMP4O75379 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VAMP4O75379 Y_RNA.100-201ENST00000363141 102 ntBASIC5□□□□□ -1.61
VAMP4O75379 SNORD51-201ENST00000384320 80 ntBASIC5□□□□□ -1.61
VAMP4O75379 MIR199A2-201ENST00000385289 110 ntBASIC5□□□□□ -1.61
VAMP4O75379 OR2AS1P-201ENST00000427827 319 ntBASIC5□□□□□ -1.61
VAMP4O75379 NDUFA5P4-201ENST00000436704 385 ntBASIC5□□□□□ -1.61
VAMP4O75379 MTND4P19-201ENST00000446659 478 ntBASIC5□□□□□ -1.61
VAMP4O75379 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5□□□□□ -1.61
VAMP4O75379 AC007547.1-201ENST00000462177 490 ntBASIC5□□□□□ -1.61
VAMP4O75379 RPL7L1P8-201ENST00000469911 741 ntBASIC5□□□□□ -1.61
VAMP4O75379 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5□□□□□ -1.61
VAMP4O75379 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5□□□□□ -1.61
VAMP4O75379 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5□□□□□ -1.61
VAMP4O75379 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5□□□□□ -1.61
VAMP4O75379 RN7SKP82-201ENST00000516786 223 ntBASIC5□□□□□ -1.61
VAMP4O75379 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5□□□□□ -1.61
VAMP4O75379 AP000857.1-201ENST00000532151 543 ntBASIC5□□□□□ -1.61
VAMP4O75379 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5□□□□□ -1.61
VAMP4O75379 MIR4742-201ENST00000581069 85 ntBASIC5□□□□□ -1.61
VAMP4O75379 MIR4775-201ENST00000581168 75 ntBASIC5□□□□□ -1.61
VAMP4O75379 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5□□□□□ -1.61
VAMP4O75379 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5□□□□□ -1.61
VAMP4O75379 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5□□□□□ -1.61
VAMP4O75379 AL354798.1-201ENST00000622505 329 ntBASIC5□□□□□ -1.61
VAMP4O75379 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5□□□□□ -1.61
VAMP4O75379 AC091925.2-201ENST00000625059 256 ntBASIC5□□□□□ -1.61
VAMP4O75379 LDHAL6CP-202ENST00000550738 3224 ntBASIC5□□□□□ -1.61
VAMP4O75379 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
VAMP4O75379 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5□□□□□ -1.61
VAMP4O75379 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VAMP4O75379 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VAMP4O75379 UBE3AP2-201ENST00000429033 2259 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 ZNF734P-201ENST00000419494 1534 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VAMP4O75379 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VAMP4O75379 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.99□□□□□ -1.61
VAMP4O75379 Y_RNA.67-201ENST00000362870 100 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 RN7SKP44-201ENST00000363602 316 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 Y_RNA.419-201ENST00000384041 102 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 Y_RNA.474-201ENST00000384341 102 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.99□□□□□ -1.61
VAMP4O75379 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.99□□□□□ -1.61
VAMP4O75379 MTATP6P16-201ENST00000434543 526 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 HMGB1P18-201ENST00000438801 619 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 RPS29P7-201ENST00000439662 171 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 AC006480.1-201ENST00000449887 378 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.99□□□□□ -1.61
VAMP4O75379 MRPS17P3-201ENST00000465453 385 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 RPL23AP11-201ENST00000475260 469 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
VAMP4O75379 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.99□□□□□ -1.61
VAMP4O75379 AP005435.4-201ENST00000529514 284 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 AC128657.1-201ENST00000549459 145 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 AC106785.1-201ENST00000565935 262 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 AL355812.1-201ENST00000603215 216 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 AL139395.1-201ENST00000603662 160 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 uc_338.11-201ENST00000619132 160 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 AL161637.1-201ENST00000622380 412 ntBASIC4.99□□□□□ -1.61
VAMP4O75379 C2orf27A-204ENST00000623058 969 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms