Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS4BO75351 TVP23BP1-201ENST00000557500 617 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS4BO75351 AL138976.2-201ENST00000563989 694 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS4BO75351 AC104662.1-201ENST00000604448 511 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 MIR8059-201ENST00000620427 81 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 AC112200.1-201ENST00000625015 234 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS4BO75351 AC008013.2-202ENST00000637965 364 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS4BO75351 AC004972.1-201ENST00000623934 2209 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 MTND5P17-201ENST00000418405 1603 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS4BO75351 AC016588.2-201ENST00000632484 3021 ntBASIC4.05□□□□□ -1.76
VPS4BO75351 MIR372-201ENST00000362225 67 ntBASIC4.05□□□□□ -1.76
VPS4BO75351 RNU6-1284P-201ENST00000363701 100 ntBASIC4.05□□□□□ -1.76
VPS4BO75351 RNU1-132P-201ENST00000364300 164 ntBASIC4.05□□□□□ -1.76
VPS4BO75351 RNU6-1068P-201ENST00000410958 103 ntBASIC4.05□□□□□ -1.76
VPS4BO75351 RAC1P3-201ENST00000416129 580 ntBASIC4.05□□□□□ -1.76
VPS4BO75351 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS4BO75351 RPL36AP53-201ENST00000432891 316 ntBASIC4.05□□□□□ -1.76
VPS4BO75351 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS4BO75351 AC073415.1-201ENST00000449240 153 ntBASIC4.05□□□□□ -1.76
VPS4BO75351 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS4BO75351 RPS20P20-201ENST00000460498 340 ntBASIC4.05□□□□□ -1.76
VPS4BO75351 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
VPS4BO75351 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS4BO75351 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS4BO75351 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.05□□□□□ -1.76
VPS4BO75351 CENPUP1-201ENST00000526649 1202 ntBASIC4.05□□□□□ -1.76
VPS4BO75351 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS4BO75351 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS4BO75351 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS4BO75351 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS4BO75351 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS4BO75351 MIR4775-201ENST00000581168 75 ntBASIC4.05□□□□□ -1.76
VPS4BO75351 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.05□□□□□ -1.76
VPS4BO75351 BNIP3P10-201ENST00000605360 577 ntBASIC4.05□□□□□ -1.76
VPS4BO75351 AL359314.1-201ENST00000616913 261 ntBASIC4.05□□□□□ -1.76
VPS4BO75351 AL354950.2-201ENST00000617939 290 ntBASIC4.05□□□□□ -1.76
VPS4BO75351 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS4BO75351 AC093648.1-201ENST00000623546 606 ntBASIC4.05□□□□□ -1.76
VPS4BO75351 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
VPS4BO75351 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS4BO75351 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS4BO75351 Z82217.1-201ENST00000625157 8149 ntBASIC4.05□□□□□ -1.76
VPS4BO75351 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS4BO75351 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
VPS4BO75351 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS4BO75351 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS4BO75351 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
VPS4BO75351 RNU6-960P-201ENST00000364056 120 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 RNU6-996P-201ENST00000365438 107 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 AL136372.1-201ENST00000403060 228 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 RNU2-36P-201ENST00000410361 191 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 RNU2-39P-201ENST00000410604 198 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 RNU6-373P-201ENST00000411247 98 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 SDCBPP3-201ENST00000419629 891 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 AC245054.1-201ENST00000420944 258 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 SRIP2-201ENST00000428470 166 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS4BO75351 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS4BO75351 ATP5HP2-201ENST00000433885 485 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS4BO75351 RPL23AP46-201ENST00000438548 490 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 AL138799.3-201ENST00000438968 350 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS4BO75351 AL162151.2-201ENST00000448875 158 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 AL162389.1-201ENST00000449233 177 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS4BO75351 SNORD97-201ENST00000459187 142 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 RPS27AP1-201ENST00000475545 471 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 RPS15AP36-201ENST00000492022 382 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 AC093278.1-201ENST00000494700 600 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 NIPA2P2-201ENST00000496376 1083 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 RPL38P4-201ENST00000502376 214 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS4BO75351 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS4BO75351 RNA5SP401-201ENST00000515920 127 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 HMGB1P41-201ENST00000520234 440 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 FAM60DP-201ENST00000524174 632 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS4BO75351 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS4BO75351 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS4BO75351 AC015917.1-201ENST00000579654 510 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 AC025946.2-201ENST00000603398 234 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 C8orf59P2-201ENST00000603441 271 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 TUG1_2.1-201ENST00000614234 87 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 AC063943.3-201ENST00000615562 356 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 AL353748.2-201ENST00000622148 471 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 AC243312.2-201ENST00000623340 601 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS4BO75351 ZNF962P-201ENST00000443465 3140 ntBASIC4.04□□□□□ -1.76
VPS4BO75351 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS4BO75351 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS4BO75351 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS4BO75351 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS4BO75351 MTND4P12-201ENST00000498999 1377 ntBASIC4.03□□□□□ -1.76
VPS4BO75351 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms