Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.46□□□□□ -1.86
LDB3O75112 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.46□□□□□ -1.86
LDB3O75112 AC138915.3-201ENST00000562908 1389 ntBASIC3.46□□□□□ -1.86
LDB3O75112 MAPK10-372ENST00000641954 3413 ntBASIC3.46□□□□□ -1.86
LDB3O75112 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LDB3O75112 MTND5P33-201ENST00000571250 1450 ntBASIC3.46□□□□□ -1.86
LDB3O75112 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LDB3O75112 RPS4XP5-202ENST00000449995 1334 ntBASIC3.45□□□□□ -1.86
LDB3O75112 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
LDB3O75112 AC244517.1-201ENST00000606030 2086 ntBASIC3.45□□□□□ -1.86
LDB3O75112 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.45□□□□□ -1.86
LDB3O75112 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LDB3O75112 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
LDB3O75112 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LDB3O75112 AC007685.1-201ENST00000329806 452 ntBASIC3.45□□□□□ -1.86
LDB3O75112 Y_RNA.509-201ENST00000384506 99 ntBASIC3.45□□□□□ -1.86
LDB3O75112 MIR607-201ENST00000385241 96 ntBASIC3.45□□□□□ -1.86
LDB3O75112 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
LDB3O75112 AL356776.1-201ENST00000406574 447 ntBASIC3.45□□□□□ -1.86
LDB3O75112 RNU6ATAC-201ENST00000408749 126 ntBASIC3.45□□□□□ -1.86
LDB3O75112 MTND3P17-201ENST00000416968 344 ntBASIC3.45□□□□□ -1.86
LDB3O75112 PIGFP2-201ENST00000421400 651 ntBASIC3.45□□□□□ -1.86
LDB3O75112 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
LDB3O75112 AL353777.1-201ENST00000425552 326 ntBASIC3.45□□□□□ -1.86
LDB3O75112 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.45□□□□□ -1.86
LDB3O75112 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.45□□□□□ -1.86
LDB3O75112 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.45□□□□□ -1.86
LDB3O75112 AC104308.1-201ENST00000454621 333 ntBASIC3.45□□□□□ -1.86
LDB3O75112 MTND1P11-201ENST00000456661 876 ntBASIC3.45□□□□□ -1.86
LDB3O75112 SNORD121B-201ENST00000458838 81 ntBASIC3.45□□□□□ -1.86
LDB3O75112 HMGN1P11-201ENST00000508668 303 ntBASIC3.45□□□□□ -1.86
LDB3O75112 AC114786.4-201ENST00000508771 728 ntBASIC3.45□□□□□ -1.86
LDB3O75112 FTH1P9-201ENST00000513251 355 ntBASIC3.45□□□□□ -1.86
LDB3O75112 AC025465.4-201ENST00000513422 638 ntBASIC3.45□□□□□ -1.86
LDB3O75112 RN7SKP83-201ENST00000516512 178 ntBASIC3.45□□□□□ -1.86
LDB3O75112 RNU6-445P-201ENST00000516949 107 ntBASIC3.45□□□□□ -1.86
LDB3O75112 RNU6-1220P-201ENST00000517126 108 ntBASIC3.45□□□□□ -1.86
LDB3O75112 NARSP2-201ENST00000518524 679 ntBASIC3.45□□□□□ -1.86
LDB3O75112 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.45□□□□□ -1.86
LDB3O75112 AP003497.1-201ENST00000528472 562 ntBASIC3.45□□□□□ -1.86
LDB3O75112 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LDB3O75112 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.45□□□□□ -1.86
LDB3O75112 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.45□□□□□ -1.86
LDB3O75112 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.45□□□□□ -1.86
LDB3O75112 AC123904.2-201ENST00000548059 300 ntBASIC3.45□□□□□ -1.86
LDB3O75112 AL157687.1-201ENST00000554853 619 ntBASIC3.45□□□□□ -1.86
LDB3O75112 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.45□□□□□ -1.86
LDB3O75112 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.45□□□□□ -1.86
LDB3O75112 AC025678.1-201ENST00000567861 338 ntBASIC3.45□□□□□ -1.86
LDB3O75112 AC034105.4-201ENST00000568304 277 ntBASIC3.45□□□□□ -1.86
LDB3O75112 AC012182.1-201ENST00000570133 895 ntBASIC3.45□□□□□ -1.86
LDB3O75112 RNU6-87P-201ENST00000607561 108 ntBASIC3.45□□□□□ -1.86
LDB3O75112 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.45□□□□□ -1.86
LDB3O75112 AL590099.1-201ENST00000615276 138 ntBASIC3.45□□□□□ -1.86
LDB3O75112 AC139792.3-201ENST00000623525 224 ntBASIC3.45□□□□□ -1.86
LDB3O75112 AP003400.5-201ENST00000624827 617 ntBASIC3.45□□□□□ -1.86
LDB3O75112 AC119674.1-207ENST00000641355 633 ntBASIC3.45□□□□□ -1.86
LDB3O75112 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.45□□□□□ -1.86
LDB3O75112 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LDB3O75112 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
LDB3O75112 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LDB3O75112 MAPK10-373ENST00000641983 6772 ntBASIC3.44□□□□□ -1.86
LDB3O75112 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
LDB3O75112 USP8P1-201ENST00000494673 3183 ntBASIC3.44□□□□□ -1.86
LDB3O75112 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.44□□□□□ -1.86
LDB3O75112 AC009902.3-201ENST00000606235 2172 ntBASIC3.44□□□□□ -1.86
LDB3O75112 ZNF285B-201ENST00000561698 1767 ntBASIC3.44□□□□□ -1.86
LDB3O75112 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
LDB3O75112 RNA5SP51-201ENST00000364750 119 ntBASIC3.44□□□□□ -1.86
LDB3O75112 RPL21P111-201ENST00000418453 477 ntBASIC3.44□□□□□ -1.86
LDB3O75112 AL035423.1-201ENST00000420331 213 ntBASIC3.44□□□□□ -1.86
LDB3O75112 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.44□□□□□ -1.86
LDB3O75112 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.44□□□□□ -1.86
LDB3O75112 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.44□□□□□ -1.86
LDB3O75112 ARPC3P1-201ENST00000437218 533 ntBASIC3.44□□□□□ -1.86
LDB3O75112 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.44□□□□□ -1.86
LDB3O75112 RPS15AP9-201ENST00000439856 381 ntBASIC3.44□□□□□ -1.86
LDB3O75112 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.44□□□□□ -1.86
LDB3O75112 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.44□□□□□ -1.86
LDB3O75112 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.44□□□□□ -1.86
LDB3O75112 MTND1P9-201ENST00000453775 944 ntBASIC3.44□□□□□ -1.86
LDB3O75112 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.44□□□□□ -1.86
LDB3O75112 RPL7P15-201ENST00000461190 712 ntBASIC3.44□□□□□ -1.86
LDB3O75112 RPL23AP41-201ENST00000484754 458 ntBASIC3.44□□□□□ -1.86
LDB3O75112 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.44□□□□□ -1.86
LDB3O75112 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.44□□□□□ -1.86
LDB3O75112 HMGB1P22-201ENST00000505315 124 ntBASIC3.44□□□□□ -1.86
LDB3O75112 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.44□□□□□ -1.86
LDB3O75112 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.44□□□□□ -1.86
LDB3O75112 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.44□□□□□ -1.86
LDB3O75112 RNU2-58P-201ENST00000516403 183 ntBASIC3.44□□□□□ -1.86
LDB3O75112 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.44□□□□□ -1.86
LDB3O75112 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.44□□□□□ -1.86
LDB3O75112 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.44□□□□□ -1.86
LDB3O75112 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.44□□□□□ -1.86
LDB3O75112 OR5D17P-201ENST00000531492 978 ntBASIC3.44□□□□□ -1.86
LDB3O75112 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.44□□□□□ -1.86
LDB3O75112 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.44□□□□□ -1.86
LDB3O75112 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.44□□□□□ -1.86
LDB3O75112 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms