Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.67□□□□□ -1.98
BRD4O60885 AL135752.1-201ENST00000479477 471 ntBASIC2.67□□□□□ -1.98
BRD4O60885 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
BRD4O60885 RNU6-751P-201ENST00000516382 101 ntBASIC2.67□□□□□ -1.98
BRD4O60885 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.67□□□□□ -1.98
BRD4O60885 FAM92A1P1-201ENST00000528023 890 ntBASIC2.67□□□□□ -1.98
BRD4O60885 AC007115.1-201ENST00000546853 234 ntBASIC2.67□□□□□ -1.98
BRD4O60885 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
BRD4O60885 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.67□□□□□ -1.98
BRD4O60885 VN1R80P-201ENST00000597126 338 ntBASIC2.67□□□□□ -1.98
BRD4O60885 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.67□□□□□ -1.98
BRD4O60885 AC108479.2-201ENST00000617314 601 ntBASIC2.67□□□□□ -1.98
BRD4O60885 LINC00216-201ENST00000623548 1126 ntBASIC2.67□□□□□ -1.98
BRD4O60885 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.67□□□□□ -1.98
BRD4O60885 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
BRD4O60885 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.67□□□□□ -1.98
BRD4O60885 AL513185.3-201ENST00000433335 1300 ntBASIC2.67□□□□□ -1.98
BRD4O60885 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
BRD4O60885 RNU6-1226P-201ENST00000384317 107 ntBASIC2.66□□□□□ -1.98
BRD4O60885 RPL7L1P10-201ENST00000427790 463 ntBASIC2.66□□□□□ -1.98
BRD4O60885 AL445687.1-201ENST00000439946 251 ntBASIC2.66□□□□□ -1.98
BRD4O60885 AC108078.2-201ENST00000510750 236 ntBASIC2.66□□□□□ -1.98
BRD4O60885 RNU6-488P-201ENST00000515918 99 ntBASIC2.66□□□□□ -1.98
BRD4O60885 RNU6-760P-201ENST00000516078 97 ntBASIC2.66□□□□□ -1.98
BRD4O60885 SNORA31.13-201ENST00000516624 135 ntBASIC2.66□□□□□ -1.98
BRD4O60885 RNU6-889P-201ENST00000517189 103 ntBASIC2.66□□□□□ -1.98
BRD4O60885 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.66□□□□□ -1.98
BRD4O60885 AC087808.1-201ENST00000520501 361 ntBASIC2.66□□□□□ -1.98
BRD4O60885 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.66□□□□□ -1.98
BRD4O60885 AC067805.1-201ENST00000559344 470 ntBASIC2.66□□□□□ -1.98
BRD4O60885 AL359821.1-201ENST00000605519 182 ntBASIC2.66□□□□□ -1.98
BRD4O60885 AC016911.1-201ENST00000613297 452 ntBASIC2.66□□□□□ -1.98
BRD4O60885 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.66□□□□□ -1.98
BRD4O60885 AC079597.1-201ENST00000624306 508 ntBASIC2.66□□□□□ -1.98
BRD4O60885 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
BRD4O60885 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.66□□□□□ -1.98
BRD4O60885 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
BRD4O60885 MTND4P1-201ENST00000457501 1466 ntBASIC2.65□□□□□ -1.98
BRD4O60885 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.65□□□□□ -1.98
BRD4O60885 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.65□□□□□ -1.98
BRD4O60885 SNORA51.11-201ENST00000384442 131 ntBASIC2.65□□□□□ -1.98
BRD4O60885 MIR518E-201ENST00000385252 88 ntBASIC2.65□□□□□ -1.98
BRD4O60885 RNU6-821P-201ENST00000390995 107 ntBASIC2.65□□□□□ -1.98
BRD4O60885 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.65□□□□□ -1.98
BRD4O60885 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.65□□□□□ -1.98
BRD4O60885 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.65□□□□□ -1.98
BRD4O60885 RPL23AP76-201ENST00000441860 458 ntBASIC2.65□□□□□ -1.98
BRD4O60885 SNRPGP9-201ENST00000456025 225 ntBASIC2.65□□□□□ -1.98
BRD4O60885 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.65□□□□□ -1.98
BRD4O60885 AC079804.2-201ENST00000490376 200 ntBASIC2.65□□□□□ -1.98
BRD4O60885 AC107393.1-201ENST00000512403 346 ntBASIC2.65□□□□□ -1.98
BRD4O60885 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.65□□□□□ -1.98
BRD4O60885 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.65□□□□□ -1.98
BRD4O60885 AC011374.2-201ENST00000607135 526 ntBASIC2.65□□□□□ -1.98
BRD4O60885 MTND2P41-201ENST00000637599 773 ntBASIC2.65□□□□□ -1.98
BRD4O60885 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
BRD4O60885 AL139276.1-201ENST00000311910 1001 ntBASIC2.64□□□□□ -1.99
BRD4O60885 RNU6-173P-201ENST00000364215 104 ntBASIC2.64□□□□□ -1.99
BRD4O60885 SNORA6-201ENST00000384033 151 ntBASIC2.64□□□□□ -1.99
BRD4O60885 MIR144-201ENST00000384886 86 ntBASIC2.64□□□□□ -1.99
BRD4O60885 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
BRD4O60885 AC124916.1-201ENST00000444020 547 ntBASIC2.64□□□□□ -1.99
BRD4O60885 AL139109.1-201ENST00000455491 297 ntBASIC2.64□□□□□ -1.99
BRD4O60885 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.64□□□□□ -1.99
BRD4O60885 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.64□□□□□ -1.99
BRD4O60885 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.64□□□□□ -1.99
BRD4O60885 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.64□□□□□ -1.99
BRD4O60885 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
BRD4O60885 MIR3616-201ENST00000584070 92 ntBASIC2.64□□□□□ -1.99
BRD4O60885 AC004852.3-201ENST00000614131 326 ntBASIC2.64□□□□□ -1.99
BRD4O60885 AL449363.1-201ENST00000617815 186 ntBASIC2.64□□□□□ -1.99
BRD4O60885 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.64□□□□□ -1.99
BRD4O60885 AC018926.3-201ENST00000618841 406 ntBASIC2.64□□□□□ -1.99
BRD4O60885 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
BRD4O60885 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
BRD4O60885 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
BRD4O60885 Y_RNA.116-201ENST00000363292 103 ntBASIC2.63□□□□□ -1.99
BRD4O60885 MIR493-201ENST00000385254 89 ntBASIC2.63□□□□□ -1.99
BRD4O60885 RPL27AP8-201ENST00000424277 446 ntBASIC2.63□□□□□ -1.99
BRD4O60885 EZH2P1-201ENST00000431167 291 ntBASIC2.63□□□□□ -1.99
BRD4O60885 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.63□□□□□ -1.99
BRD4O60885 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.63□□□□□ -1.99
BRD4O60885 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.63□□□□□ -1.99
BRD4O60885 AL359385.1-201ENST00000456509 365 ntBASIC2.63□□□□□ -1.99
BRD4O60885 MTAPP1-201ENST00000489154 819 ntBASIC2.63□□□□□ -1.99
BRD4O60885 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
BRD4O60885 SNORA48.9-201ENST00000516419 162 ntBASIC2.63□□□□□ -1.99
BRD4O60885 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.63□□□□□ -1.99
BRD4O60885 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.63□□□□□ -1.99
BRD4O60885 FAM60BP-201ENST00000578364 658 ntBASIC2.63□□□□□ -1.99
BRD4O60885 AC018618.2-201ENST00000604770 446 ntBASIC2.63□□□□□ -1.99
BRD4O60885 AC006329.2-201ENST00000611491 394 ntBASIC2.63□□□□□ -1.99
BRD4O60885 AC091834.1-201ENST00000614543 472 ntBASIC2.63□□□□□ -1.99
BRD4O60885 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
BRD4O60885 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
BRD4O60885 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
BRD4O60885 RNU6-989P-201ENST00000362756 107 ntBASIC2.62□□□□□ -1.99
BRD4O60885 SNORA27.3-201ENST00000364937 134 ntBASIC2.62□□□□□ -1.99
BRD4O60885 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.62□□□□□ -1.99
BRD4O60885 AC234781.2-201ENST00000426370 994 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms