Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RPS15AP10-201ENST00000432472 382 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM13O60858 CEACAMP1-201ENST00000434624 1035 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 AC104332.1-201ENST00000440471 797 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 AL121871.1-201ENST00000443413 436 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM13O60858 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.5□□□□□ -1.69
TRIM13O60858 HMGB3P30-201ENST00000457863 606 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM13O60858 FTH1P21-201ENST00000512179 511 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 RNU4-77P-201ENST00000516692 156 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.5□□□□□ -1.69
TRIM13O60858 IGHV3-76-201ENST00000522465 295 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM13O60858 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM13O60858 HMGB3P26-201ENST00000560051 582 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 AC007225.2-201ENST00000562529 256 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.5□□□□□ -1.69
TRIM13O60858 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.5□□□□□ -1.69
TRIM13O60858 IGHV3-29-201ENST00000604817 344 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 AC096772.1-201ENST00000609146 564 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 AL031666.3-201ENST00000609320 1006 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM13O60858 FTX_2.1-201ENST00000618816 94 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 AC103705.1-201ENST00000619013 241 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM13O60858 AC011155.2-201ENST00000623202 216 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 AC091905.4-201ENST00000623432 202 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM13O60858 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM13O60858 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM13O60858 AC107027.3-201ENST00000565095 3473 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM13O60858 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM13O60858 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM13O60858 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM13O60858 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM13O60858 AC097714.1-201ENST00000511272 1647 ntBASIC4.5□□□□□ -1.69
TRIM13O60858 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM13O60858 AC005332.5-201ENST00000591222 2919 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 AL122126.1-201ENST00000546905 1318 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM13O60858 OR14L1P-202ENST00000641545 3009 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TRIM13O60858 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM13O60858 RNU6-774P-201ENST00000363238 107 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM13O60858 RNU6-432P-201ENST00000384196 109 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 Y_RNA.473-201ENST00000384333 102 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 Y_RNA.483-201ENST00000384380 101 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM13O60858 RNU2-23P-201ENST00000410545 195 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM13O60858 AL359265.2-201ENST00000434367 631 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 AL353597.2-202ENST00000434901 373 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM13O60858 AC073850.1-201ENST00000449243 255 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 AC005297.2-201ENST00000450430 606 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM13O60858 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM13O60858 AC079804.1-201ENST00000461922 436 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 RPL7AP28-201ENST00000464513 571 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 MED28P2-201ENST00000475771 317 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 RPL21P93-201ENST00000480465 489 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 AC093767.1-201ENST00000504523 156 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM13O60858 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM13O60858 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM13O60858 AP003385.6-201ENST00000531603 374 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM13O60858 AC022080.3-201ENST00000544433 482 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.49□□□□□ -1.69
TRIM13O60858 AC060771.1-201ENST00000582031 164 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM13O60858 Z98751.3-201ENST00000604447 521 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 AL138721.1-201ENST00000616756 179 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM13O60858 AL023881.1-201ENST00000621088 301 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 AL606534.2-204ENST00000635008 178 ntBASIC4.49□□□□□ -1.69
TRIM13O60858 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM13O60858 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM13O60858 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TRIM13O60858 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TRIM13O60858 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TRIM13O60858 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM13O60858 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM13O60858 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TRIM13O60858 NXPH1-205ENST00000602349 1953 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 RNU6-28P-201ENST00000362378 107 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 RNU6-562P-201ENST00000362731 107 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 RNA5SP28-201ENST00000363841 119 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 RNU5A-8P-201ENST00000364102 114 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM13O60858 AC019155.1-201ENST00000382242 574 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 RNU1-63P-201ENST00000383902 164 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 RNU6-1207P-201ENST00000384343 107 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 MIR1302-6-201ENST00000408466 90 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 MIR1252-201ENST00000408861 65 ntBASIC4.48□□□□□ -1.69
TRIM13O60858 RNU2-21P-201ENST00000410368 188 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms